124c43d2511935aab2d1f56d0aea92c1bdb97d7c braney Fri Jul 18 10:40:59 2025 -0700 more fixin's to hgLiftOver diff --git src/hg/hgLiftOver/hgLiftOver.c src/hg/hgLiftOver/hgLiftOver.c index e188bdd2698..58c3a21edbc 100644 --- src/hg/hgLiftOver/hgLiftOver.c +++ src/hg/hgLiftOver/hgLiftOver.c @@ -423,30 +423,34 @@ fromDb = cartCgiUsualString(cart, HGLFT_FROMDB_VAR, "0"); toOrg = cartCgiUsualString(cart, HGLFT_TOORG_VAR, "0"); toDb = cartCgiUsualString(cart, HGLFT_TODB_VAR, "0"); cartOrg = hOrganism(cartDb); if (sameWord(fromOrg,"0")) fromOrg = NULL; if (sameWord(fromDb,"0")) fromDb = NULL; if (sameWord(toOrg,"0")) toOrg = NULL; if (sameWord(toDb,"0")) toDb = NULL; if (sameWord(cartDb,"0")) cartDb = NULL; +if ((fromDb != NULL) && !sameOk(fromOrg, hOrganism(fromDb))) + fromDb = NULL; +if ((toDb != NULL) && !sameOk(toOrg, hOrganism(toDb))) + toDb = NULL; for (this = chainList; this != NULL; this = this->next) { if (sameOk(this->fromDb ,fromDb) && sameOk(this->toDb, toDb)) { choice = this; break; } double score = scoreLiftOverChain(this, fromOrg, fromDb, toOrg, toDb, cartOrg, cartDb, dbRank, dbDbHash); if (score > bestScore) { choice = this; bestScore = score; } }