04cec773db5f693feee13b50f64c2f58579400cc
gperez2
  Thu Jul 17 14:33:36 2025 -0700
Updating the mouseOver and the hgc fields for bedMethyl, refs #33504

diff --git src/hg/lib/bedMethyl.c src/hg/lib/bedMethyl.c
index 4c60d013a1f..543f1a03289 100644
--- src/hg/lib/bedMethyl.c
+++ src/hg/lib/bedMethyl.c
@@ -271,35 +271,35 @@
 
 static char *bedMethylAutoSqlString =
 {
 "table bedMethyl\n"
 "\"Browser extensible data for bedmethyl files (bed9+9)\"\n"
 "    (\n"
 "    string chrom;      \"Chromosome (or contig, scaffold, etc.)\"\n"
 "    uint   chromStart; \"Start position in chromosome\"\n"
 "    uint   chromEnd;   \"End position in chromosome\"\n"
 "    string name;       \"Name of item\"\n"
 "    uint   score;      \"Score from 0-1000\"\n"
 "    char[1] strand;    \"+ or -\"\n"
 "    uint thickStart;   \"Start of where display should be thick (start codon)\"\n"
 "    uint thickEnd;     \"End of where display should be thick (stop codon)\"\n"
 "    uint reserved;     \"Used as itemRgb as of 2004-11-22\"\n"
-"    string nValidCov;       \"Valid Coverage|N_mod + N_otherMod + N_canonical\"\n"
-"    string percMod;       \"Percent Modified\"\n"
-"    string nMod;       \"N_mod|Number of calls with a modified base\"\n"
-"    string nCanon;       \"N_canonical|Number of calls with a canonical base\"\n"
-"    string nOther;       \"N_otherMod|Number of calls with a modified base, other modification\"\n"
-"    string nDelete;       \"N_delete|Number of reads with a deletion at this reference position\"\n"
-"    string nFail;       \"N_fail|Number of calls where the probability of the call was below the threshold. \"\n"
-"    string nDiff;       \"N_diff|Number of reads with a base other than the canonical base for this modification. \"\n"
-"    string nNoCall;       \"N_nocall|Number of reads aligned to this reference position, with the correct canonical base, but without a base modification call.\"\n"
+"    string nValidCov;       \"Valid coverage|Reads with valid modification calls\"\n"
+"    string percMod;       \"Percent modified|Percent of valid calls that are modified\"\n"
+"    string nMod;       \"Modified calls|Number of calls with a modified base\"\n"
+"    string nCanon;       \"Canonical calls|Number of calls with a canonical base\"\n"
+"    string nOther;       \"Other modification calls|Number of calls with a modified base, other modification\"\n"
+"    string nDelete;       \"Reads with a deletion|Number of reads with a deletion at this reference position\"\n"
+"    string nFail;       \"Low-confidence calls|Number of calls where the probability of the call was below the threshold\"\n"
+"    string nDiff;       \"Reads with a base mismatch|Number of reads with a base other than the canonical base for this modification\"\n"
+"    string nNoCall;       \"Reads with no modification call|Number of reads aligned to this reference position, with the correct canonical base, but without a base modification call\"\n"
 "    )\n"
 "\n"
 };
 
 #include "asParse.h"
 
 struct asObject *bedMethylAsObj()
 /* Return asObject describing fields of bedMethyl object */
 {   
 return asParseText(bedMethylAutoSqlString);
 }