Commits for lrnassar

v486_preview2 to v486_base (2025-08-04 to 2025-08-11) v486

fceca77094f54cf65d73d7cef5db47a0c074195a Mon Aug 4 15:58:05 2025 -0700

• Fixing the makefile which was complaining Error 23 because the file was not owned by qateam.
  • src/hg/htdocs/makefile - lines changed 1, context: html, text, full: html, text

9ab37c22a7bd5ac747c9c8ce0271ecffd1d4862f Mon Aug 4 16:41:35 2025 -0700

• Adding the Donate button up to the blue nav bar, refs #36202
  • src/hg/htdocs/inc/gbPageStartHardcoded.html - lines changed 4, context: html, text, full: html, text
  • src/hg/htdocs/inc/globalNavBar.inc - lines changed 6, context: html, text, full: html, text

379665d3f5ff46d9c4ae126c7a6c870f5589762a Mon Aug 4 16:44:24 2025 -0700

• Revert "Adding the Donate button up to the blue nav bar, refs #36202" This reverts commit 9ab37c22a7bd5ac747c9c8ce0271ecffd1d4862f.
  • src/hg/htdocs/inc/gbPageStartHardcoded.html - lines changed 4, context: html, text, full: html, text
  • src/hg/htdocs/inc/globalNavBar.inc - lines changed 6, context: html, text, full: html, text

241bc6b486d5da90860df83aec006e30363e43e7 Wed Aug 6 10:53:04 2025 -0700

• Updating the RNA track group label for GenArk, refs #36093
  • src/hg/makeDb/doc/asmHubs/groups.txt - lines changed 1, context: html, text, full: html, text

2b19cd11a40b973defb2f4c00b9002634bd6c9bd Thu Aug 7 15:11:10 2025 -0700

• Flipping the file names because the item count check was comparing the new count as the old count and vice versa. This did not change the check at all, since it was looking for 10% absolute difference, but led to a confusing output. No RM.
  • src/hg/utils/otto/panelApp/doPanelApp.py - lines changed 3, context: html, text, full: html, text

e0c0d49c409e33e0997922ecf4dfec2924fd4191 Fri Aug 8 12:01:35 2025 -0700

• Silent release of long read transcripts track, refs #35122
  • src/hg/makeDb/trackDb/human/hg38/long_read_transcripts.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm10/long_read_transcripts.ra - lines changed 3, context: html, text, full: html, text

32eb33d095c68da0fa54075d94e4e927b6cb4d99 Fri Aug 8 13:27:51 2025 -0700

• Silent release of long read transcripts track, refs #35122
  • src/hg/makeDb/trackDb/mouse/mm10/trackDb.ra - lines changed 1, context: html, text, full: html, text

705f2336e85d630113f716b97c66008df31584f2 Fri Aug 8 14:23:40 2025 -0700

• Staging news release for CLS long transcripts track, refs #35122
  • src/hg/htdocs/goldenPath/newsarch.html - lines changed 29, context: html, text, full: html, text
  • src/hg/htdocs/images/clsLongTranscript.png - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)
  • src/hg/htdocs/indexNews.html - lines changed 12, context: html, text, full: html, text