f8ab4521716f62297723211e07e55df0bb660e0f jnavarr5 Wed Jul 23 15:46:49 2025 -0700 Making some typo and styling changes, refs #36033 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 313840f1806..928e8102a3c 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -55,44 +55,44 @@ email list. We send around one short announcement email every two weeks.</p> <p>Smaller software changes are not announced here. A summary of the three-weekly release changes can be found <a target=_blank href="https://genecats.gi.ucsc.edu/builds/versions.html">here</a>. For the full list of our daily code changes head to our <a href="https://github.com/ucscGenomeBrowser/kent/commits/master" target=_blank>GitHub page</a>. Lastly, see our <a href="credits.html" target="_blank"> credits page</a> for acknowledgments of the data we host.</p> <!-- ============= 2025 archived news ============= --> <a name="2025"></a> <a name="072325"></a> <h2>July 23, 2025 Bionano DLE-1 CTTAAG sites for human, hg38 and hg19</h2> <p> -We are happy to annouce the release the Bionano DLE-1 track for human assemblies +We are happy to announce the release of the Bionano DLE-1 track for human assemblies <a href="/cgi-bin/hgTrackUi?db=hg38&position=default&g=genotypeArrays" target="_blank">hg38</a> and <a href="/cgi-bin/hgTrackUi?db=hg19&position=default&g=genotypeArrays" target="_blank">hg19</a>. -These tracks shows the CTTAAG sites used by the +These tracks show the CTTAAG sites used by the <a href="https://www.bionano.com/" target="_blank">Bionano Optical Genome Mapping system</a>, an assay to detect structural variants. </p> <p> OGM (Optical Genome Mapping) begins with the isolation of ultra-high molecular weight (UHMW) DNA from blood, bone marrow aspirates, cultured cells (including chorionic villi and amniocytes), -tissue, or tumor biopsies. A single enzymatic reaction places fluorescent labels all throughout +tissue, or tumor biopsies. A single enzymatic reaction places fluorescent labels throughout the genome at a specific sequence motif. The labeled DNA molecules are linearized in nanochannel arrays on the chip. Changes in the patterning or spacing of the labels are identified by software -solutions to accurately detect all classes of structural variants. The OGM data generated can be +solutions to detect all classes of structural variants accurately. The OGM data generated can be analyzed alone, or in combination with sequencing or array data.</p> <p> We would like to thank Bionano Laboratories for providing the BED files for the OGM data. We would also like to thank Max Haeussler and Jairo Navarro for the creation and release of the UCSC Genome Browser tracks. </p> <a name="071525"></a> <h2>July 15, 2025 New pathogenicity prediction scores for human: MutScore and M-CAP</h2> <p> We have two new pathogenicity prediction score tracks available in our <a href="/cgi-bin/hgTrackUi?db=hg19&position=default&g=predictionScoresSuper" target="_blank">Deleteriousness Predictions</a> super track.</p> <ul> <li><a href="/cgi-bin/hgTrackUi?db=hg19&position=default&g=mutScore"