5569016ae987f9b3c1f5af9973b6fdd15a7ee2fb jcasper Sun Aug 3 01:11:18 2025 -0700 Installing updated hg.conf files from UCSC servers diff --git confs/rr.hg.conf confs/rr.hg.conf index 5b4bd264126..dc3ed725c2e 100644 --- confs/rr.hg.conf +++ confs/rr.hg.conf @@ -215,29 +215,35 @@ # Enables the pop-up when clicking items option on the configure page canDoHgcInPopUp=true # Enables the grouping feature for track hubs trackHubsCanAddGroups=on # Adding more aggressive bot delay #35729 newBotDelay=on # Increases the number of items that can be queried from a BAM file BAMMaxItems=30000 # hubSpace related settings: # show the hubSpace UI -#storeUserFiles=true +###storeUserFiles=true # location of files stored by tusd -#tusdDataDir=/data/tusd/data/ +###tusdDataDir=/data/tusd/data/ # The tusd endpoint files are uploaded to -#hubSpaceTusdEndpoint=https://hubspace.soe.ucsc.edu/files +###hubSpaceTusdEndpoint=https://hubspace.soe.ucsc.edu/files # The web accessible location after tusd moves the files # when an upload is completed -#hubSpaceUrl=https://hubspace.soe.ucsc.edu/hubspace +###hubSpaceUrl=https://hubspace.soe.ucsc.edu/hubspace # let users create an api key on the hub development tab to use hubSpace from the command line -#showHubApiKey=true +###showHubApiKey=true +# if tusd is running on a different server and is mounted locally, +# rewrite the tusdDataDir value +# with the tusdMountPoint value to check files exist +###tusdMountPoint=/hubspace/ # BLAT shows locus name of the match #35993 blatShowLocus=off +# new flag for testing rm32751 turn on automatic creation of custom tracks from hgBlat results. +autoBlatBigPsl=on