1a856b5d1ebbb6ff8761c331716af73b3c8aaa1e
markd
  Tue Jul 29 12:15:26 2025 -0700
import of GENCODE Versions V49, V49lift37, and VM38

diff --git src/hg/makeDb/outside/gencode/gencodeLoad.mk src/hg/makeDb/outside/gencode/gencodeLoad.mk
index 4e6f04e42da..5e8e94ba14f 100644
--- src/hg/makeDb/outside/gencode/gencodeLoad.mk
+++ src/hg/makeDb/outside/gencode/gencodeLoad.mk
@@ -20,44 +20,44 @@
 host=$(shell hostname)
 ppid=$(shell echo $$PPID)
 tmpExt = ${host}.${ppid}.tmp
 SHELL = bash -e
 export SHELLOPTS=pipefail
 
 ##
 # programs, etc
 ##
 mach = $(shell uname -m)
 
 ##
 # Release info and files from Sanger.
 # BEGIN EDIT THESE EACH RELEASE
 ##
-#preRelease = yes
-preRelease = no
+preRelease = yes
+#preRelease = no
 #db = hg38
 #db = hg19
 db = mm39
 ifeq (${db},mm39)
-    ver = M37
-    prevVer = M36
+    ver = M38
+    prevVer = M37
 else ifeq (${db},hg38)
-    ver = 48
-    prevVer = 47
+    ver = 49
+    prevVer = 48
 else ifeq (${db},hg19)
-    verBase = 48
-    prevVerBase = 47
+    verBase = 49
+    prevVerBase = 48
     ver = ${verBase}lift37
 else
     $(error unimplement genome database: ${db})
 endif
 # END EDIT THESE EACH RELEASE
 
 ifeq (${db},mm39)
     grcRefAssembly = GRCm39
     gencodeOrg = Gencode_mouse
     ftpReleaseSubdir = release_${ver}
     annGffTypeName = chr_patch_hapl_scaff.annotation
 else ifeq (${db},hg38)
     grcRefAssembly = GRCh38
     gencodeOrg = Gencode_human
     ftpReleaseSubdir = release_${ver}