b138708088517105f8ff45aa2f31b084da587ece jcasper Sun Aug 17 01:11:15 2025 -0700 Installing updated hg.conf files from UCSC servers diff --git confs/hgwdev.hg.conf confs/hgwdev.hg.conf index 2017d7210fc..179d80c8e75 100644 --- confs/hgwdev.hg.conf +++ confs/hgwdev.hg.conf @@ -448,33 +448,35 @@ # hubSpace related settings: # show the hubSpace UI storeUserFiles=true # location of files stored by tusd tusdDataDir=/tusd # The tusd endpoint files are uploaded to hubSpaceTusdEndpoint=https://hgwdev-hubspace.gi.ucsc.edu/files # The web accessible location after tusd moves the files # when an upload is completed hubSpaceUrl=https://hgwdev.gi.ucsc.edu/hubspace # let users create an api key on the hub development tab to use hubSpace from the command line showHubApiKey=true browser.quickLift=on quickLift.lengthLimit=100000 -quickLift.insColor=127,0,0,64 +quickLift.insColor=64,127,0,64 quickLift.delColor=0,0,127,64 -quickLift.doubleColor=0,127,0,64 +quickLift.doubleColor=127,127,127,64 +quickLift.mismatchColor=255,0,0,64 + newBotDelay=on # Increases the number of items that can be queried from a BAM file BAMMaxItems=30000 # new flag for testing rm32751 turn on automatic creation of custom tracks from hgBlat results. autoBlatBigPsl=on # you can also comment it out and test that it behaves the old way as expected. # BLAT shows locus name of the match #35993 blatShowLocus=on #blatShowLocus=off # use hgcentral.genarkOrk to allow some genark hubs