a66cafab99931b29ae71c6cbb787da8f3f5fdf74
gperez2
Fri Aug 22 13:47:52 2025 -0700
Updating the mouseOver display for popular tracks, refs #36020
diff --git src/hg/makeDb/trackDb/human/trackDb.clinGen.ra src/hg/makeDb/trackDb/human/trackDb.clinGen.ra
index 1e502ddc6f2..68aa3949438 100644
--- src/hg/makeDb/trackDb/human/trackDb.clinGen.ra
+++ src/hg/makeDb/trackDb/human/trackDb.clinGen.ra
@@ -6,57 +6,57 @@
group phenDis
itemRgb on
compositeTrack on
noParentConfig on
html clinGen
track clinGenHaplo
showCfg on
priority 1
parent clinGenComp on
shortLabel ClinGen Haploinsufficiency
longLabel ClinGen Dosage Sensitivity Map - Haploinsufficiency
visibility pack
type bigBed 9 +
bigDataUrl /gbdb/$D/bbi/clinGen/clinGenHaplo.bb
- mouseOverField _mouseOver
+ mouseOver Gene/ISCA ID: $name
Haploinsufficiency score: $haploScore
Dosage Sensitivity Evidence: $haploDescription
filterValues.haploScore 0|No evidence available,1|Little evidence for dosage pathogenicity,2|Some evidence for dosage pathogenicity,3|Sufficient evidence for dosage pathogenicity,30|Gene associated with autosomal recessive phenotype,40|Dosage sensitivity unlikely
filterLabel.haploScore Dosage Sensitivity Score
urls url="$$" PMID1="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID2="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID3="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID4="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID5="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID6="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" mondoID="https://monarchinitiative.org/disease/$$"
track clinGenTriplo
priority 2
parent clinGenComp on
shortLabel ClinGen Triplosensitivity
longLabel ClinGen Dosage Sensitivity Map - Triplosensitivity
visibility pack
type bigBed 9 +
bigDataUrl /gbdb/$D/bbi/clinGen/clinGenTriplo.bb
- mouseOverField _mouseOver
+ mouseOver Gene/ISCA ID: $name
Triplosensitivity score: $triploScore
Dosage Sensitivity Evidence: $triploDescription
filterValues.triploScore 0|No evidence available,1|Little evidence for dosage pathogenicity,2|Some evidence for dosage pathogenicity,3|Sufficient evidence for dosage pathogenicity,30|Gene associated with autosomal recessive phenotype,40|Dosage sensitivity unlikely
filterLabel.triploScore Dosage Sensitivity Score
urls url="$$" PMID1="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID2="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID3="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID4="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID5="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" PMID6="https://pubmed.ncbi.nlm.nih.gov/$$/?from_single_result=$$&expanded_search_query=$$" mondoID="https://monarchinitiative.org/disease/$$"
track clinGenGeneDisease
priority 3
parent clinGenComp on
type bigBed 9 +
shortLabel ClinGen Validity
longLabel ClinGen Gene-Disease Validity Classification
bigDataUrl /gbdb/$D/bbi/clinGen/clinGenGeneDisease.bb
visibility pack
- mouseOverField Mouseover
+ mouseOver Gene/ISCA ID: $geneSymbol
Disease(s): $name
Classification: $Classification
urls geneSymbol="https://search.clinicalgenome.org/kb/genes/$$" ClinGenURL="https://search.clinicalgenome.org/kb/gene-validity/$$" HGNCid="https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/$$" MONDOid="https://monarchinitiative.org/disease/$$"
skipFields Mouseover
sepFields MONDOid,SOPversion
itemRgb on
noScoreFilter on
searchIndex name,geneSymbol,HGNCid,MONDOid,Classification
filterValues.Inheritance Autosomal Dominant,Autosomal Recessive,Semidominant,X-Linked,X-linked recessive,Other
filterLabel.Inheritance Inheritance Pattern
filterValues.SOPversion SOP4,SOP5,SOP6,SOP7
filterLabel.SOPversion ClinGen SOP Version Number
filterValues.Classification Definitive,Strong,Moderate,Limited,Animal Model Only,No Reported Evidence,Disputed,Refuted
filterLabel.Classification ClinGen Gene-Disease Validity Classification
bedNameLabel Associated Disease
track clinGenCspec