6eff6b0c070a6bcbaf607c38239f51616d83bc96
hiram
  Wed Sep 10 19:45:33 2025 -0700
eliminate the rnaSeqData include statement no longer exists refs #13553

diff --git src/hg/utils/automation/asmHubTrackDb.sh src/hg/utils/automation/asmHubTrackDb.sh
index 8820e629e52..f39f93e0ee3 100755
--- src/hg/utils/automation/asmHubTrackDb.sh
+++ src/hg/utils/automation/asmHubTrackDb.sh
@@ -1006,34 +1006,34 @@
 type bigGenePred
 bigDataUrl bbi/%s.ebiGene.bb%s
 searchIndex name,name2
 labelFields name,name2
 defaultLabelFields name2
 labelSeparator \" \"
 html html/%s.ebiGene\n\n" "${ebiVersion}" "${ebiVersion}" "${asmId}" "${searchTrix}" "${asmId}"
 
 $scriptDir/asmHubEbiGene.pl $asmId $buildDir/html/$asmId.names.tab $buildDir/bbi/$asmId > $buildDir/html/$asmId.ebiGene.html "${ebiVersion}"
  fi
 
 fi
 
 ###################################################################
 # hubLinks is for mouseStrains specific hub only
-export hubLinks="/hive/data/genomes/asmHubs/hubLinks"
-if [ -s ${hubLinks}/${asmId}/rnaSeqData/$asmId.trackDb.txt ]; then
-  printf "include rnaSeqData/%s.trackDb.txt\n\n" "${asmId}"
-fi
+# export hubLinks="/hive/data/genomes/asmHubs/hubLinks"
+# if [ -s ${hubLinks}/${asmId}/rnaSeqData/$asmId.trackDb.txt ]; then
+#   printf "include rnaSeqData/%s.trackDb.txt\n\n" "${asmId}"
+# fi
 ##  for mouse strain hubs only
 ## turned off 2022-11-02 until these can be correctly translated
 ## to GenArk naming schemes
 ### if [ -s "${buildDir}/$asmId.bigMaf.trackDb.txt" ]; then
 ###   printf "include %s.bigMaf.trackDb.txt\n\n" "${asmId}"
 ### fi
 
 ###################################################################
 # check for blat sameSpecies liftOver, then link to lift over chain file
 export lo=`ls -d ${buildDir}/trackData/blat.* 2> /dev/null | wc -l`
 
 if [ "${lo}" -gt 0 ]; then
   mkdir -p ${buildDir}/liftOver
   for loS in `ls -d ${buildDir}/trackData/blat.* 2> /dev/null`
   do