c18913f32735ca8e22e6a930ba00be3e7bafebee
markd
  Mon Sep 8 19:11:01 2025 -0700
GENCODE V49 release

diff --git src/hg/makeDb/doc/hg38/gencode.txt src/hg/makeDb/doc/hg38/gencode.txt
index e4606390430..67e10c9669e 100644
--- src/hg/makeDb/doc/hg38/gencode.txt
+++ src/hg/makeDb/doc/hg38/gencode.txt
@@ -1470,42 +1470,43 @@
 
     # if final release, Update 'Release Notes' 
     #  human/hg38/wgEncodeGencodeSuper.html
 
     jkmake DBS=hg38
 
     # check joiner 
     pushd /hive/data/genomes/hg38/bed/gencodeV${ver}/hgcImport${pre}
     make  -f ~/kent/src/hg/makeDb/outside/gencode/gencodeLoad.mk joinerCheck
 
     # check tracks in browser sandbox
     # commit all
     jkmake DBS=hg38 alpha
 #########################################################################
 2025-07-28: import of UCSC GENCODE group processing of GENCODE V49 pre-release for GENCODE Versions (markd)
+2025-09-08: final release
    # edit hg/makeDb/outside/gencode/gencodeLoad.mk to set release type and versions
 
    # pre-release shell variables 
        ver=49
        ensver=115
        pre="Pre"
        ensdate='July 2025 pre-release' 
    # release shell variables 
        ver=49
        ensver=115
        pre=""
-       ensdate='May 2025'
+       ensdate='Sept 2025'
     
 
     # download, build and load tables
     mkdir -p /hive/data/genomes/hg38/bed/gencodeV${ver}/hgcImport${pre}
     pushd /hive/data/genomes/hg38/bed/gencodeV${ver}/hgcImport${pre}
 
     (time nice make -O -j 32 -f ~/kent/src/hg/makeDb/outside/gencode/gencodeLoad.mk) >&build.1.out&
 
     # compare tables from previous release to see if number changed makes
     # sense.  Results are in gencode-cmp.tsv
 
     # generate trackDb and joiner blurb
     pushd ~/kent/src/hg/makeDb/trackDb
     ../outside/gencode/bin/gencodeGenerateTrackDbs hg38 ${ver} ${ensver} "${ensdate}"