f50fbe16a5fe95c1e0c1a84e88b689f06e9c682f gperez2 Fri Sep 26 17:46:49 2025 -0700 Replacing the Assembly Hub wiki links with the new Assembly Hub User Guide page, refs #34740 diff --git src/hg/htdocs/goldenPath/help/publicHubGuidelines.html src/hg/htdocs/goldenPath/help/publicHubGuidelines.html index 58a487956b4..e6a6a2bee37 100755 --- src/hg/htdocs/goldenPath/help/publicHubGuidelines.html +++ src/hg/htdocs/goldenPath/help/publicHubGuidelines.html @@ -54,31 +54,31 @@ squish, or dense), and try to have no more than 10 tracks enabled by default upon first connecting your hub. </li> <li>Have a descriptionUrl html page specified in your hub.txt. This should be a URL to a description page for your entire hub, often public hubs will link to a full-text paper or to their laboratory webpage that describes the research presented in the hub. These links are presented on the Public Hubs page as a hyperlink on the longLabel presented in the hub.txt, while the shortLabel is a hyperlink to the hub.txt location. </li> </ul> <p style="text-indent: 20px"><b>Required for only assembly hubs:</b></p> <ul> <li>Add a gateway page for each assembly by having a htmlPath line for each genome not already hosted by UCSC in the <a target="_blank" - href="http://genomewiki.ucsc.edu/index.php/Assembly_Hubs#genomes.txt">genomes.txt</a>. + href="assemblyHubHelp.html#genomesTxt">genomes.txt</a>. </li> <li>The following settings should properly be set in your genomes.txt (The last 3 settings will make it easier to find assembly hub species in hgGateway by UI search): </li> <ul> <li>defaultPos</li> <li>scientificName</li> <li>organism</li> <li>description</li> </ul> </ul> <a id="recommendedGuidelines"></a> <h2>Recommended Guidelines</h2> <p>These guidelines in the following sections are recommended to improve user experience, but are