a6e1b8d8399b6f62b8b02d4082437caeb452fa42 jnavarr5 Thu Sep 25 15:38:08 2025 -0700 Fixing typos and differences between the track description page and the mouseOver tooltip, refs #36405 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index deaed62ef58..702a82a69dd 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -142,38 +142,38 @@ </p> <p> Items in this track are colored according to the likelihood that the gene-disease association is true:</p> <ul> <li> <font style="color: green;"><b>Green</b></font> - Definitive</li> <li> <font style="color: blue;"><b>Blue</b></font> - Strong</li> <li> <font style="color: orange;"><b>Orange</b></font> - Moderate</li> <li> <font style="color: red;"><b>Red</b></font> - Limited</li> <li> <font style="color: gray;"><b>Gray</b></font> - Refuted</li> </ul> <p>Each <b>mouseover</b> tooltip provides the following information:</p> <ul> <li><strong>G2P ID</strong>: Unique identifier assigned by the Gene2Phenotype (G2P) database.</li> - <li><strong>Number of PubMed IDs</strong>: Count of publications associated with the variant.</li> + <li><strong>Variant Consequence</strong>: Predicted effect each allele of a variant has on a + transcript.</li> + <li><strong>Disease Name</strong>: Name of the disease associated with the variant.</li> + <li><strong>PubMed IDs</strong>: Publications associated with the variant.</li> <li><strong>Molecular Mechanism</strong>: Description of the molecular processes and interactions causing pathogenic effects.</li> <li><strong>Allelic Requirements</strong>: Number of alleles required at a locus to produce a pathogenic phenotype (e.g., monoallelic, biallelic).</li> - <li><strong>Variant Consequence</strong>: Predicted effect each allele of a variant has on a - transcript.</li> - <li><strong>Disease Name</strong>: Name of the disease associated with the variant.</li> <li><strong>Date of Last Review</strong>: Most recent date the entry was manually reviewed.</li> </ul> <div class="text-center"> <a href="https://genome.ucsc.edu/s/jnavarr5/ddg2p_announcement"> <img src="../images/newsArchImages/ddg2p.png" alt="DDG2P track with the mouseover tooltip on the BRCA1 gene." width='75%'> <p class="gbsCaption"> <em>Genome Browser screenshot of the DDG2P track with the mouseover tooltip on the BRCA1 gene.</em> </p></a> </div> <p> We would like to thank the <a href="https://www.ebi.ac.uk/gene2phenotype/about/project" target="_blank">G2P project</a> for making this data publicly available. We would also like to thank Jaidan Jenkins-Kiefer and Jairo Navarro Gonzalez for the creation and release of the Genome Browser