a6e1b8d8399b6f62b8b02d4082437caeb452fa42 jnavarr5 Thu Sep 25 15:38:08 2025 -0700 Fixing typos and differences between the track description page and the mouseOver tooltip, refs #36405 diff --git src/hg/makeDb/trackDb/human/decipherContainer.html src/hg/makeDb/trackDb/human/decipherContainer.html index 10a0bbc5ce5..af301a315e5 100644 --- src/hg/makeDb/trackDb/human/decipherContainer.html +++ src/hg/makeDb/trackDb/human/decipherContainer.html @@ -126,38 +126,38 @@ <p> For the <b>DDG2P track</b>, items are colored according to the likelihood that the gene-disease association is true:</p> <ul> <li> <font style="color: green;"><b>Green</b></font> - Definitive</li> <li> <font style="color: blue;"><b>Blue</b></font> - Strong</li> <li> <font style="color: orange;"><b>Orange</b></font> - Moderate</li> <li> <font style="color: red;"><b>Red</b></font> - Limited</li> <li> <font style="color: gray;"><b>Gray</b></font> - Refuted</li> </ul> <p>Each <b>mouseover</b> tooltip provides the following information:</p> <ul> <li><strong>G2P ID</strong>: Unique identifier assigned by the Gene2Phenotype (G2P) database.</li> - <li><strong>Number of PubMed IDs</strong>: Count of publications associated with the variant.</li> + <li><strong>Variant Consequence</strong>: Predicted effect each allele of a variant has on a + transcript.</li> + <li><strong>Disease Name</strong>: Name of the disease associated with the variant.</li> + <li><strong>PubMed IDs</strong>: Publications associated with the variant.</li> <li><strong>Molecular Mechanism</strong>: Description of the molecular processes and interactions causing pathogenic effects.</li> <li><strong>Allelic Requirements</strong>: Number of alleles required at a locus to produce a pathogenic phenotype (e.g., monoallelic, biallelic).</li> - <li><strong>Variant Consequence</strong>: Predicted effect each allele of a variant has on a - transcript.</li> - <li><strong>Disease Name</strong>: Name of the disease associated with the variant.</li> <li><strong>Date of Last Review</strong>: Most recent date the entry was manually reviewed.</li> </ul> <H2>Method</H2> <P> Data provided by the DECIPHER project group are imported and processed to create a simple BED track to annotate the genomic regions associated with individual patients. </p> <p> Data provided by the Gene2Phenotype project group were imported and processed to create a BED-based track annotating genomic regions associated with individual patients. Standard genome assembly coordinates and gene annotations were used to map DDG2P entries to the browser. </P>