e6ad1f3c830ac6c46b539afb4c75d463ee323457 jnavarr5 Fri Oct 17 11:10:05 2025 -0700 Making changes from code review, refs #36505 diff --git src/hg/htdocs/inc/hgMyData.html src/hg/htdocs/inc/hgMyData.html index 5aa7d0beff9..7b7c5ff3af1 100755 --- src/hg/htdocs/inc/hgMyData.html +++ src/hg/htdocs/inc/hgMyData.html @@ -1,103 +1,102 @@ <div id='hubUpload'> <div id='fileTableInfoDiv' class='tabSection'> <p> Upload your track hub files to UCSC and view your bigBed, bigWig, BAM, VCF, and <a href="/goldenPath/help/hgTrackHubHelp.html#format">other supported files</a> -- no need to rely on third-party hosting services such as Dropbox, Google Drive, or AWS. </p> <p> Each account is allocated 10 GB of storage. While we strive to maintain uninterrupted - access, please be sure to maintain your own backups. Data persistence over the long term + access, please maintain your own backups. Data persistence over the long term is not guaranteed. To request additional storage space, please <a href="../contacts.html">contact us</a>. </p> <details> <summary><b>How to use Hub Space</b></summary> <p>There are two primary ways to upload your files:</p> <ol> <li> Upload a single (or group) of binary-indexed files for immediate visualization.</li> <li> Upload an entire track hub along with all supporting files (hub.txt, bigWig, bigBed, etc.) to visualize the hub.</li> </ol> <p> If a hub.txt file is not provided when uploading the data files, a hub.txt file is automatically generated. The generated hub.txt file is configured with the <a href="/goldenPath/help/trackDb/trackDbHub.html#useOneFile">useOneFile trackDb setting</a>, and as a result, each hub is limited to a single genome assembly.</p> <p> <i>Editing the generated hub.txt file is not yet supported.</i> To customize the hub configuration or data display, replace the generated hub.txt file with your own version after uploading the data files. </p> <div style="display: flex; align-items: center; gap: 150px;"> <p style="flex: 1;"> By default, your most recently used genome assembly is selected after choosing which - files to upload. To use a different assembly, the - <em>popular assemblies</em> drop-down menu or the search - box can be used to select another genome assembly. + files to upload. Use the <em>popular assemblies</em> drop-down menu or the search + box to select another genome assembly. </p> <img src="../images/HubSpaceUpload.png" alt="Example of the upload dialog box for Hub Space" width="35%"> </div> </details> </div> <div id='filesDiv' class='tabSection'> <table id="filesTable" class="sessionTable stripe hover row-border compact" borderwidth=0> </table> <div id='selectedFileInfo' class="tabSection" style="margin-bottom: 20px;"> <div id='placeHolderInfo'>Select files for more options</div> <div style="display: none"> <span id='numberSelectedFiles'></span> selected. <button id='viewSelectedFiles'></button><button id='deleteSelectedFiles'></button> </div> </div> <div> For information on making track hubs, see the following pages: <ul> <li><a href='../goldenPath/help/hubQuickStart.html' style='color:#121E9A' target=_blank>Quick Start Guide</a></li> <li><a href='../goldenPath/help/hgTrackHubHelp.html' style='color:#121E9A' TARGET=_blank>Track Hub User's Guide</a></li> <li><a href='../goldenPath/help/hgTrackHubHelp#Hosting' style='color:#121E9A' target=_blank>External Hosting Space For Your Track Hub</a></li> <li><a href='../goldenPath/help/trackDb/trackDbHub.html' style='color:#121E9A' target=_blank>Track Hub Settings Reference</a></li> <li><a href='../goldenPath/help/publicHubGuidelines.html' style='color:#121E9A' target=_blank>Guidelines for Submitting a Public Hub</a></li> </ul> <BR>You may also <a href='../contacts.html' style='color:#121E9A'>contact us</a> if you have any issues or questions on hub development. </div> <div id='newTrackHubDialog' class='myTitleClass' title='Create New Track Hub' style='background:white; width:725px; display:none'> <div> <label id='hubNameLabel' for="hubName">Enter the name of the hub:</label> <input id='hubName'></input> <br> <label id='dbLabel' for="">Enter the genome assembly database of the hub:</label> <input id='db'></input> </div> <!-- <div id='CustomTrackOptions' > <div> <label class='gbInputLabel' for='name'>Name:</label> <input type='text' name='customName' id='customName' value='' class='text ui-widget-content ui-corner-all'> </div> <div> <br><label class='gbInputLabel' for='description'>Description:</label> <input type='text' name='customDescription' id='customDescription' value='' class='text ui-widget-content ui-corner-all' style='width:80%'> </div> <div> <br> <p><span class='gbInputLabel'> Color:</span> <input type='text' id='customColorInput' value='0xffffff'> <input id='customColorPicker'> </div> </div> --> <div> <input class='gbButton' id="doNewCollection" type="submit" value="Save" > </div> </div>