faa3f79076ac44a5209f73de8e344ee08880c54b
lrnassar
  Wed Nov 19 15:38:32 2025 -0800
Improving the labels around the new rearrangement display check box and mouseover help icon, refs #32857

diff --git src/hg/hgBlat/hgBlat.c src/hg/hgBlat/hgBlat.c
index 3689277de00..1b88fed8be9 100644
--- src/hg/hgBlat/hgBlat.c
+++ src/hg/hgBlat/hgBlat.c
@@ -2124,41 +2124,41 @@
 
 printf("<TR>\n");
 printf("<TD COLSPAN=1 ALIGN=CENTER style='overflow:hidden;white-space:nowrap;font-size:0.9em'>\n");
 cgiMakeCheckBoxWithId("allResults", allResults, "allResults");
 printf("<span id=allResultsText>All Results (no minimum matches)</span>");
 // clicking on the All Results text clicks the checkbox.
 jsOnEventById("click", "allResultsText", 
     "document.mainForm.allResults.click();"
     "return false;"   // cancel the default
     );
 printf("</TD>\n");
 
 printf("<TD COLSPAN=1 ALIGN=CENTER style='overflow:hidden;white-space:nowrap;font-size:0.9em'>\n");
 printf("<label for='autoRearr'>");
 cgiMakeCheckBoxWithId("autoRearr", autoRearr, "autoRearr");
-printf("<span> Optimize for Rearrangements </span>");
+printf("<span> Optimize Display for Rearrangements </span>");
 printf("</label>");
-printInfoIcon("Rearrangement display (aka 'snakes' tracks) can show "
-"duplications of the query sequence using multiple lines and lines between "
-"fragments, see our "
+printInfoIcon("<b>Rearrangement display</b> (aka 'snakes' tracks) can show "
+"duplications of the query sequence using multiple lines, "
+"with connecting lines between fragments. It can also "
+"better display inversions. See the "
 "<a href='/goldenPath/help/chain.html#rearrangement'>"
-"snakes documentation page"
-"</a>"
-"for more "
-"details. You can also switch this on or off on the BLAT track configuration "
-"page by checking the 'Rearrangement display' box.");
+"snakes documentation"
+"</a> for more "
+"details. You can switch this on or off from the BLAT track configuration "
+"page by checking the <b>Rearrangement display</b> box.");
 printf("</TD>\n");
 
 printf("<TD COLSPAN=4 style='text-align:right'>\n");
 printf("<INPUT style=' font-size:1.0em; width:100px' TYPE=SUBMIT NAME=Submit VALUE=Submit>\n");
 printf("<INPUT style='font-size:1.0em' TYPE=SUBMIT NAME=Lucky VALUE=\"I'm feeling lucky\">\n");
 printf("<INPUT style='font-size:1.0em' TYPE=SUBMIT NAME=Clear VALUE=Clear>\n");
 printf("</TD>\n");
 printf("</TR>\n");
 
 printf("<TR>\n"); 
 puts("<TD COLSPAN=5 WIDTH=\"100%\">\n" 
     "Paste in a query sequence to find its location in the\n"
     "the genome. Multiple sequences may be searched \n"
     "if separated by lines starting with '>' followed by the sequence name.\n"
     "</TD>\n"