Varaico (Variation Research Advancing Insight in Complex Organisms) was created using literature mining, similar to AVADA. Varaico variants are generated by an automated process that extracts purely factual information about genes from scientific papers (by matching strings against gene names) and HGVS variant descriptions (using regular expressions). Varaico aims to reduce false-positive gene and variant mentions and link them together appropriately, but nonetheless, many variants displayed are not mapped to the genomic position intended by the authors.
+Varaico Variants (suppl) contains variants extracted from supplementary data files +using similar methods as in the Varaico track.
+For data questions, Varaico can be contacted at jbirgmei@gmail.com
Genomic locations of variants are labeled with the HGNC gene symbol and the variant change. Mouse over the variants to show the gene, variant, latest author/year/title, number of publications mentioning the variant, and variant effect.