ef238e6ab90d807a28fc144fa520b50c0d1b9801 mspeir Mon Nov 3 17:12:17 2025 -0800 changing genome-source to github references, refs #35031 diff --git src/hg/htdocs/goldenPath/help/gbic.html src/hg/htdocs/goldenPath/help/gbic.html index aef7a4f5811..67549376684 100755 --- src/hg/htdocs/goldenPath/help/gbic.html +++ src/hg/htdocs/goldenPath/help/gbic.html @@ -283,41 +283,41 @@ this should be added to your crontab file: </p> <pre><code>sudo bash browserSetup.sh clean</code></pre> <p> If you find that you need the Kent command line utilities in addition to the Genome Browser, the <code>addTools</code> command will install all the utilities into <code>/usr/local/bin</code>: </p> <pre><code>sudo bash browserSetup.sh addTools</code></pre> <p> A majority of these utilities require an <code>.hg.conf</code> file in the users home directory. For an example of a minimal <code>.hg.conf</code> file, click -<a href='http://genome-source.soe.ucsc.edu/gitlist/kent.git/blob/master/src/product/minimal.hg.conf' title=''>here</a>. +<a href='http://github.com/ucscGenomeBrowser/kent/blob/master/src/product/minimal.hg.conf' title=''>here</a>. </p> <p> If you find a bug, or if your Linux distribution is not supported, please contact <a href='mailto::genome-mirror@soe.ucsc.edu' title=''>genome-mirror@soe.ucsc.edu</a>. </p> <p> More details about the Genome Browser installation are available -<a href='http://genome-source.soe.ucsc.edu/gitlist/kent.git/tree/master/src/product' title=''>here</a>. +<a href='http://github.com/ucscGenomeBrowser/kent/tree/master/src/product' title=''>here</a>. </p> <a name='all-gbic-options'></a> <h2>All GBiC options</h2> <p> Here is the full listing of commands and options supported by the GBiC program: </p> <pre><code>browserSetup.sh [options] [command] [assemblyList] - UCSC genome browser install script command is one of: install - install the genome browser on this machine. This is usually required before any other commands are run. minimal - download only a minimal set of tables. Missing tables are