846b16c08f03187d48734d7a860a8d1ff8528570
gperez2
  Fri Nov 14 18:53:15 2025 -0800
Releasing and announcing the Varaico tracks, refs #36612

diff --git src/hg/makeDb/trackDb/human/trackDb.ra src/hg/makeDb/trackDb/human/trackDb.ra
index 7da2fac8522..8fa57a3a02d 100644
--- src/hg/makeDb/trackDb/human/trackDb.ra
+++ src/hg/makeDb/trackDb/human/trackDb.ra
@@ -146,31 +146,31 @@
 group phenDis
 visibility hide
 color 0,100,0
 type bigBed 9 +
 release alpha
 mouseOverField trait
 bigDataUrl /gbdb/$D/bbi/phegeni.bb
 urls studyId=https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=$$ geneId1=https://www.ncbi.nlm.nih.gov/gene/?term=$$%5Buid%5D geneId2=https://www.ncbi.nlm.nih.gov/gene/?term=$$%5Buid%5D analysisId=https://www.ncbi.nlm.nih.gov/projects/SNP/gViewer/gView.cgi?aid=$$ catalogId=https://www.ebi.ac.uk/gwas/search?query=$$
 
 track varsInPubs
 shortLabel Variants in Papers
 longLabel Genetic Variants mentioned in scientific publications
 superTrack on
 group phenDis
 type bed 3
-#pennantIcon Updated red ../goldenPath/newsarch.html#080125 "Updated Varaico Variants to release 2 and new Varaico Variants (suppl) track Nov. 06, 2025"
+pennantIcon Updated red ../goldenPath/newsarch.html#111425 "Updated Varaico Variants to release 2 and new Varaico Variants (suppl) track Nov. 14, 2025"
 
         track mastermind
         shortLabel Mastermind Variants
         longLabel Genomenon Mastermind Variants extracted from full text publications
         visibility dense
         type bigBed 9 +
         urls url=$$
         bigDataUrl /gbdb/$D/bbi/mastermind.bb
         noScoreFilter on
         exonNumbers off
         mouseOver <b>Variant</b>: $name<br>  <b>Gene</b>: $gene<br> <b>Linkout</b>: <a href="$url" target="_blank">$_mouseOver</a><br> <b>Article count 1</b>: $mmcnt1<br> <b>Article count 2</b>: $mmcnt2<br> <b>Article count 3</b>: $mmcnt3
         itemRgb on
         filter.mmcnt1 0
         filter.mmcnt2 0
         filter.mmcnt3 0
@@ -227,51 +227,51 @@
         parent varsInPubs pack
         urls pubmedIds="https://www.ncbi.nlm.nih.gov/pubmed/$$"
         mouseOver $name found in ${numPubmedIds} PubMed articles
         pennantIcon New red ../goldenPath/newsarch.html#080125 "Released Aug. 01, 2025"
         html varsInPubs
 
         track varaico
         shortLabel Varaico Variants
         longLabel Varaico Variants extracted from full text publications, titles, and abstracts
         visibility dense
         type bigBed 9 +
         bigDataUrl /gbdb/$D/bbi/varaico.bb
         noScoreFilter on
         exonNumbers off
         # itemRgb on
-        dataVersion release 2 (20251027)
+        dataVersion release 2 (20251110)
         parent varsInPubs pack
         urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" rgene="https://www.ncbi.nlm.nih.gov/nuccore/$$"
         mouseOver <b>$hgncSymbol $variantOrigStrs</b> in: $author ($journal, $year) - $title <br> <b>Number of publications:</b> $articlesCount <br> <b>Variant Effect:</b> $variantEffect
-        #pennantIcon Updated red ../goldenPath/newsarch.html#110625 "Nov. 06, 2025"
+        pennantIcon Updated red ../goldenPath/newsarch.html#111425 "Nov. 14, 2025"
         html varaico.html
 
         track varaicoSuppl
         shortLabel Varaico Variants (suppl)
         longLabel Varaico Variants extracted from Supplementary Data
         visibility dense
         type bigBed 9 +
         bigDataUrl /gbdb/$D/bbi/varaicoSuppl.bb
         noScoreFilter on
         exonNumbers off
         # itemRgb on
-        dataVersion release 2 (20251027)
+        dataVersion release 2 (20251110)
         parent varsInPubs pack
         urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" rgene="https://www.ncbi.nlm.nih.gov/nuccore/$$"
         mouseOver <b>$hgncSymbol $variantOrigStrs</b> in: $author ($journal, $year) - $title <br> <b>Number of publications:</b> $articlesCount <br> <b>Variant Effect:</b> $variantEffect
-        #pennantIcon New red ../goldenPath/newsarch.html#110625 "Released Nov. 06, 2025"
+        pennantIcon New red ../goldenPath/newsarch.html#111425 "Released Nov. 14, 2025"
         html varaico.html
 
 track caseControl
 compositeTrack on
 shortLabel Case Control
 longLabel Case Control Consortium
 group phenDis
 visibility hide
 type chromGraph
 minMax 0,15
 linesAt 5,10
 
     track cccTrendPvalBd
     parent caseControl
     shortLabel CCC Bipolar Dis