3c1a5b0ba4e9a44e2d62b7dfbd521b813e2e9305
jnavarr5
Mon Nov 10 16:38:58 2025 -0800
Updating the colors on the track description page to reflect the colors that are now used in the track, refs #36469
diff --git src/hg/makeDb/trackDb/human/g2p.html src/hg/makeDb/trackDb/human/g2p.html
index 0bef2a87aa3..04825953af6 100644
--- src/hg/makeDb/trackDb/human/g2p.html
+++ src/hg/makeDb/trackDb/human/g2p.html
@@ -1,34 +1,35 @@
Description
These tracks display genes associated with severe developmental disorders. The track can be used to
filter genomic sequencing data from individuals with genetic disorders to identify likely causative
variants and accelerate diagnosis.
Display Conventions and Configuration
For each track, items are colored according to the likelihood that the gene-disease
association is true:
- - Green - Definitive
- - Blue - Strong
- - Orange - Moderate
- - Red - Limited
- - Gray - Refuted
+ - Dark-green - Definitive
+ - Green - Strong
+ - Light-green - Moderate
+ - Pink - Limited
+ - Red - Disputed
+ - Dark-red - Refuted
Each mouseover tooltip provides the following information:
- G2P ID: Unique identifier assigned by the Gene2Phenotype (G2P) database.
- Variant Consequence: Predicted effect each allele of a variant has on a
transcript.
- Disease Name: Name of the disease associated with the variant.
- PubMed IDs: Publications associated with the variant.
- Molecular Mechanism: Description of the molecular processes and interactions
causing pathogenic effects.
- Allelic Requirements: Number of alleles required at a locus to produce a
pathogenic phenotype (e.g., monoallelic, biallelic).
- Date of Last Review: Most recent date the entry was manually reviewed.