3c1a5b0ba4e9a44e2d62b7dfbd521b813e2e9305 jnavarr5 Mon Nov 10 16:38:58 2025 -0800 Updating the colors on the track description page to reflect the colors that are now used in the track, refs #36469 diff --git src/hg/makeDb/trackDb/human/g2p.html src/hg/makeDb/trackDb/human/g2p.html index 0bef2a87aa3..04825953af6 100644 --- src/hg/makeDb/trackDb/human/g2p.html +++ src/hg/makeDb/trackDb/human/g2p.html @@ -1,34 +1,35 @@ <h2>Description</h2> <p> These tracks display genes associated with severe developmental disorders. The track can be used to filter genomic sequencing data from individuals with genetic disorders to identify likely causative variants and accelerate diagnosis. </p> <h2>Display Conventions and Configuration</h2> <p> For each track, items are colored according to the likelihood that the gene-disease association is true:</p> <ul> - <li> <font style="color: green;"><b>Green</b></font> - Definitive</li> - <li> <font style="color: blue;"><b>Blue</b></font> - Strong</li> - <li> <font style="color: orange;"><b>Orange</b></font> - Moderate</li> - <li> <font style="color: red;"><b>Red</b></font> - Limited</li> - <li> <font style="color: gray;"><b>Gray</b></font> - Refuted</li> + <li> <font style="color: rgb(39,103,73);"><b> Dark-green</b></font> - Definitive</li> + <li> <font style="color: rgb(56,161,105);"><b>Green</b></font> - Strong</li> + <li> <font style="color: rgb(104,211,145);"><b>Light-green</b></font> - Moderate</li> + <li> <font style="color: rgb(252,129,129);"><b>Pink</b></font> - Limited</li> + <li> <font style="color: rgb(229,62,62);"><b>Red</b></font> - Disputed</li> + <li> <font style="color: rgb(155,44,44);"><b>Dark-red</b></font> - Refuted</li> </ul> <p>Each <b>mouseover</b> tooltip provides the following information:</p> <ul> <li><strong>G2P ID</strong>: Unique identifier assigned by the Gene2Phenotype (G2P) database.</li> <li><strong>Variant Consequence</strong>: Predicted effect each allele of a variant has on a transcript.</li> <li><strong>Disease Name</strong>: Name of the disease associated with the variant.</li> <li><strong>PubMed IDs</strong>: Publications associated with the variant.</li> <li><strong>Molecular Mechanism</strong>: Description of the molecular processes and interactions causing pathogenic effects.</li> <li><strong>Allelic Requirements</strong>: Number of alleles required at a locus to produce a pathogenic phenotype (e.g., monoallelic, biallelic).</li> <li><strong>Date of Last Review</strong>: Most recent date the entry was manually reviewed.</li> </ul>