d972170022c5cbf6be7c1fdf31afba23d826608b
braney
  Tue Jan 20 10:33:00 2026 -0800
when quickLifting SQL genepreds be a little more forgiving of the
alignment  no RM

diff --git src/hg/hgc/hgc.c src/hg/hgc/hgc.c
index 67a84ca656e..717890f0fd5 100644
--- src/hg/hgc/hgc.c
+++ src/hg/hgc/hgc.c
@@ -9553,31 +9553,31 @@
         table = trackDbSetting(tdb, "dbTableName");
         }
     else
         table = tdb->table;
     struct hash *chainHash = newHash(8);
     struct sqlConnection *conn = hAllocConn(liftDb);
 
 // using this loader on genePred tables with less than 15 fields may be a problem.
 extern struct genePred *genePredExtLoad15(char **row);
 
     char extraWhere[4096];
     sqlSafef(extraWhere, sizeof extraWhere, "name = \"%s\"", geneName);
     gpList = (struct genePred *)quickLiftSql(conn, quickLiftFile, table, seqName, winStart, winEnd,  NULL, extraWhere, (ItemLoader2)genePredExtLoad15, 0, chainHash);
     hFreeConn(&conn);
 
-    calcLiftOverGenePreds( gpList, chainHash, 0.0, 1.0, TRUE, NULL, NULL,  TRUE, FALSE);
+    calcLiftOverGenePreds( gpList, chainHash, 0.0, 0.0, TRUE, NULL, NULL,  TRUE, FALSE);
     }
 else
     {
     sqlSafef(query, sizeof(query), "select * from %s where name = \"%s\"", tdb->table, geneName);
     sr = sqlGetResult(conn, query);
     while ((row = sqlNextRow(sr)) != NULL)
         {
         gp = genePredLoad(row+rowOffset);
         slAddHead(&gpList, gp);
         }
 
     sqlFreeResult(&sr);
     }
 hFreeConn(&conn);
 return gpList;