0d2aae0eda9aad8255bced9aa142e457f1a25c5d
jcasper
  Sun Jan 25 01:11:16 2026 -0800
Installing updated hg.conf files from UCSC servers

diff --git confs/hgwdev.hg.conf confs/hgwdev.hg.conf
index 87b6a93f1b1..db100b08c8a 100644
--- confs/hgwdev.hg.conf
+++ confs/hgwdev.hg.conf
@@ -425,76 +425,73 @@
 # show a message when hgTracks takes longer than X seconds to load
 warnSeconds=40
 
 # use new mouseovers instead of title tags
 showMouseovers=on
 
 # we trust trackDb to know what tables and files exist on this machine
 # so we won't check at start up
 trustTrackDb=on
 
 # limit memory to 20G
 maxMem=21474836480
 
 # are we able to do hgc in pop up dialogs, a checkbox
 # on the configure page controls whether we actually will
-canDoHgcInPopUp=true
+#canDoHgcInPopUp=true
 
 browser.exportedDataHubs=on
 
 # Enables the grouping feature for track hubs
-trackHubsCanAddGroups=on
+#trackHubsCanAddGroups=on
 
 # see #33023
 bigBedMaxItems=100000
 
 # hubSpace related settings:
 # show the hubSpace UI
 storeUserFiles=true
 # location of files stored by tusd
 tusdDataDir=/tusd
 tusdMountPoint=/data/tusd
 # The tusd endpoint files are uploaded to
 hubSpaceTusdEndpoint=https://hgwdev-hubspace.gi.ucsc.edu/files
 # The web accessible location after tusd moves the files
 # when an upload is completed
 hubSpaceUrl=https://hgwdev.gi.ucsc.edu/hubspace
 # let users create an api key on the hub development tab to use hubSpace from the command line
 showHubApiKey=true
 
 # Enables the QuickLift checkbox on hgConvert
 browser.quickLift=on
 # Additional settings for QuickLift
 quickLift.lengthLimit=100000
 quickLift.insColor=64,127,0,64
 quickLift.delColor=0,0,127,64
 quickLift.doubleColor=127,127,127,64
 quickLift.mismatchColor=255,0,0,64
 
-
-newBotDelay=on
-
 # Increases the number of items that can be queried from a BAM file
 BAMMaxItems=60000
 
 # new flag for testing rm32751 turn on automatic creation of custom tracks from hgBlat results.
 autoBlatBigPsl=on
 # you can also comment it out and test that it behaves the old way as expected.
 
 # BLAT shows locus name of the match #35993
 blatShowLocus=on
 #blatShowLocus=off
 
 # Enables genark hubs to appear in assembly dropdowns for hgConvert/hgLiftOver
 genarkLiftOver=on
 
 # Enables the gear and x icon for hgTracks
-greyBarIcons=on
+#greyBarIcons=on
 
 # very experimental, only on hgwdev: support for an embedded IGV track, see #36337
 showIgv=on
 
 # Enables approved hgLogin redirect
 #login.approvedReturn=https://genome-preview.ucsc.edu/
 
 # Enables single path loading for bigBed. Also, affects bigGenePred and bigPsl.
-bigBedOnePath=off
+#bigBedOnePath=on