7151483319835fd736f3fbe0966c8f1476298d04 mspeir Tue Dec 23 12:36:27 2025 -0800 correcting title for ancient hominids announcement, adding link to announcement from home page, refs #36586 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index bb957dad930..657815c1249 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -200,52 +200,50 @@ </ul> <p> The variants have also been annotated with our <a href="/cgi-bin/hgVai" target="_blank">Variant Annotation Integrator</a> tool with functional classes such as synonymous variant, missense variant, stop gained, etc. For additional details on the track colors, as well as the filters and metadata on each variant, see the <a href="/cgi-bin/hgTrackUi?db=anoGam3&c=chr2R&g=evaSnpContainer&position=default#TRACK_HTML" target="_blank">track description page</a>.</p> <p> We would like to thank the <a href="https://www.ebi.ac.uk/eva/" target="_blank">European Variation Archive</a> for making these data publicly available. We would also like to thank Gerardo Perez, Luis Nassar, and Angie Hinrichs for the creation and release of these tracks. </p> -<!-- <a name="121525"></a> -<h2>Dec. 15, 2025 New gnomAD Missense Deleteriousness Prediction by Constraint (MPC) track for hg19</h2> +<h2>Dec. 15, 2025 Ancient Hominids track for hg38</h2> <p> We are happy to announce the release of the <a href="/cgi-bin/hgTrackUi?db=hg38&position=default&g=ancient" target="_blank">Ancient Hominids track</a> featuring data from Archaic Sequence Hub (ArcSeqHub). This track shows variants identified by ArcSeqHub's remapping of high-quality Altai Neanderthal and Denisovan genomes onto the hg38/GRCh38 genome. Variants are divided into two subtracks, one for Denisovian variants and another for Neanderthal variants. UCSC has removed those positions from the VCF without an alternate allele to show only variants that are present in the ancient genomes.</p> <div class="text-center"> <img src="/images/newsArchImages/ancientHominids.png" width='80%'></a> </div> <p> We would like to thank the <a href="http://www.arcseqhub.com/plot/-1/" target="_blank">ArcSeqHub</a> authors for making the data available. We would also like to thank Maximilian Haeussler and Matthew Speir for the creation and release of this track.</p> ---> <!-- <a name="120525"></a> <h2>Dec. 05, 2025 Hub Space: Host Your Track Hubs Directly on the Genome Browser</h2> <p> We are excited to introduce <a href="/cgi-bin/hgHubConnect#hubUpload">Hub Space</a>, a new hosting service that allows users to upload and visualize track hub files directly on the UCSC Genome Browser without relying on third-party hosting services such as Dropbox, Google Drive, or AWS. </p> <p> <b>Hub Space Features:</b><br> Each account is allocated 10 GB of storage space. While we strive to maintain uninterrupted access, please maintain your own backups. Data persistence over the long term is not