File Changes for max

v493_preview to v493_preview2 (2026-01-12 to 2026-01-19) v493

• src/hg/hgTrackUi/hgTrackUi.c
  • lines changed 72, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.
• src/hg/hgTracks/hgTracks.c
  • lines changed 1, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.
• src/hg/htdocs/style/HGStyle.css
  • lines changed 58, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.
• src/hg/inc/hui.h
  • lines changed 4, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.
• src/hg/js/utils.js
  • lines changed 4, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.
• src/hg/lib/hui.c
  • lines changed 47, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.
• src/hg/makeDb/doc/hg38/varFreqs.txt
  • lines changed 13, context: html, text, full: html, text
    c7b6da0a433f53fdf3c4137a67598d099d9ce1a5 Wed Jan 14 10:52:53 2026 -0800
    adding SFARI SPARK to varFreqs supertrack, refs #36642
• src/hg/makeDb/scripts/sparkMergeVcfAddCounts.sh
  • lines changed 74, context: html, text, full: html, text
    c7b6da0a433f53fdf3c4137a67598d099d9ce1a5 Wed Jan 14 10:52:53 2026 -0800
    adding SFARI SPARK to varFreqs supertrack, refs #36642
• src/hg/makeDb/trackDb/human/varFreqs.html
  • lines changed 120, context: html, text, full: html, text
    c7b6da0a433f53fdf3c4137a67598d099d9ce1a5 Wed Jan 14 10:52:53 2026 -0800
    adding SFARI SPARK to varFreqs supertrack, refs #36642
• src/hg/makeDb/trackDb/human/varFreqs.ra
  • lines changed 11, context: html, text, full: html, text
    c7b6da0a433f53fdf3c4137a67598d099d9ce1a5 Wed Jan 14 10:52:53 2026 -0800
    adding SFARI SPARK to varFreqs supertrack, refs #36642
• src/inc/cheapcgi.h
  • lines changed 1, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.
• src/inc/common.h
  • lines changed 3, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.
• src/lib/cheapcgi.c
  • lines changed 4, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.
• src/lib/common.c
  • lines changed 8, context: html, text, full: html, text
    fcb6dc8dfa166136193177c895ca181200850e4d Mon Jan 19 06:02:31 2026 -0800
    changing superTrack TrackUi quite a bit. Removing dropdowns and replacing them with buttons. Also adding buttons for setting all tracks or all visible tracks to a visibility. While at it, making a change to the js-query-library function (inversed the order of arguments) which was requested months ago by Brian, but I forgot to make the change after code review. Also shortening the "source data version" label to just "version". refs #36917. I changed the library function hTvDropDownClassVisOnlyAndExtra() rather than copying the code. This was because I was hesitant to copy/paste all this code into a second function, which would have been the only alternative, as the function cannot be reused as-is. So I modified the function to return the list of visibilities. It's never clear whether it's better to modify functions or copy/paste code. here, not breaking the function into smaller parts, so copy/pasting it, would risk requiring more future copy/pasted code. But the risk is to break existing tracks.