de1c9682d7637f0e01724c3aa41401c1856fe882 mspeir Mon Feb 9 18:49:33 2026 -0800 removing reference to UCSC database names, refs #37043 diff --git docs/hubs/contributedTracks.md docs/hubs/contributedTracks.md index 5fc8b71ee9f..6bdc93da683 100644 --- docs/hubs/contributedTracks.md +++ docs/hubs/contributedTracks.md @@ -78,33 +78,32 @@ ## Example genomes.txt file ``` genome GCA_000260495.2 trackDb GCA_000260495.2/trackDb.txt genome GCF_014441545.1 trackDb GCF_014441545.1/trackDb.txt genome GCF_014108235.1 trackDb GCF_014108235.1/trackDb.txt ``` List each assembly for which you have calculated annotations. The **trackDb.txt** file defines the tracks. To emphasize again, -the assembly names must be the GenBank accession identifier or -the UCSC database name, e.g.: **'GCF\_016077325.2', or 'hg38', 'mm39'**. -Refer to the [full +the assembly names must be the GenBank accession identifier, +e.g.: **'GCF\_016077325.2'**. Refer to the [full list](https://hgdownload.gi.ucsc.edu/hubs/UCSC_GI.assemblyHubList.txt) of all GenArk repository assemblies to find the correct identifier for your genome. ## Example trackDb.txt file ``` track VEuPathDBGeneModels shortLabel PAG 2026 contrib longLabel PAG 2026 - demonstrating contributed tracks to UCSC GenArk assemblies group genes type bigBed 12 . visibility pack labelFields name searchIndex name bigDataUrl veupathGenes.bb