c7eebb45ae05223d9f771acbb6abcbe061c4d6b6 hiram Wed Jan 28 14:45:46 2026 -0800 changing the word Archive in reference to GenArk to become Repository refs #37027 diff --git src/hg/makeDb/doc/asmHubs/hgdownload.index.html src/hg/makeDb/doc/asmHubs/hgdownload.index.html index 4d038cecbee..5a4dabbb88d 100755 --- src/hg/makeDb/doc/asmHubs/hgdownload.index.html +++ src/hg/makeDb/doc/asmHubs/hgdownload.index.html @@ -1,74 +1,74 @@ - + -

GenArk: UCSC Genome Archive

+

GenArk: UCSC Genome Repository

hub gateway description
primates NCBI primate genomes (49 assemblies)
mammals NCBI mammal genomes (267 assemblies)
birds NCBI bird genomes (112 assemblies)
fishes NCBI fish genomes (123 assemblies)
vertebrate NCBI other vertebrate genomes (46 assemblies)
invertebrate NCBI invertebrate genomes (375 assemblies)
fungi NCBI fungi genomes (405 assemblies)
plants NCBI plant genomes (141 assemblies)
VGP Vertebrate Genomes Project collection (233 assemblies)
globalReference Global Human Reference genomes, January 2020 (10 assemblies)
mouseStrains 16 mouse strain assembly and track hub, May 2017
legacy NCBI genomes legacy/superseded by newer versions (119 assemblies)

Please note: text file listing of 1805 NCBI/VGP genome assembly hubs

Please note, the invertebrate category contains more than just invertebrate animals. Until these clades are sorted out, with extra categories created, you will also find parasites, protozoa, and other single celled eukaryotes in the invertebrate grouping.