2ef9156ca98f85bdfd4bc2cc5c48659a042fdca2
chmalee
Wed Feb 4 11:59:11 2026 -0800
Fix typos from code review, refs #37053
diff --git src/hg/hgLiftOver/hgLiftOver.c src/hg/hgLiftOver/hgLiftOver.c
index 9d909e4bfc1..2285bd80515 100644
--- src/hg/hgLiftOver/hgLiftOver.c
+++ src/hg/hgLiftOver/hgLiftOver.c
@@ -108,30 +108,31 @@
" apiUrl: 'hubApi/findGenome?browser=mustExist&liftable=true&q=',\n"
" onSelect: function(item) {\n"
" document.mainForm."HGLFT_REFRESHONLY_VAR".value=1;\n"
" document.mainForm."HGLFT_FROMDB_VAR".value=item.genome;\n"
" document.mainForm."HGLFT_FROMORG_VAR".value=item.commonName.split('(')[0].trim();\n"
" document.mainForm.submit();\n"
" }\n"
"});\n"
, searchBarId
);
printf("\n");
printf("
\n");
printf(" \n");
printf("Currently selected genome:\n");
printf("%s (%s)\n", fromOrg, chain->fromDb);
+printf(" \n");
printf(" | \n");
// print select/options for toDb, it is more intuitive than a search bar
struct dbDb *dbList = hGetLiftOverToDatabases(chain->fromDb);
printf("\n");
printf("\n");
printf(" \n");
printLiftOverGenomeList(HGLFT_TOORG_VAR, chain->toDb, dbList, "change", onChange);
printf(" | \n");
printf("\n");
printf(" \n");
printf("\n");
printAllAssemblyListHtmlParm(chain->toDb, dbList, HGLFT_TODB_VAR, TRUE, NULL, NULL);
printf(" | \n");
@@ -430,31 +431,31 @@
fromDb = cartCgiUsualString(cart, HGLFT_FROMDB_VAR, "0");
toOrg = cartCgiUsualString(cart, HGLFT_TOORG_VAR, "0");
toDb = cartCgiUsualString(cart, HGLFT_TODB_VAR, "0");
cartOrg = hOrganism(cartDb);
if (sameWord(fromOrg,"0"))
fromOrg = NULL;
if (sameWord(fromDb,"0"))
fromDb = NULL;
if (sameWord(toOrg,"0"))
toOrg = NULL;
if (sameWord(toDb,"0"))
toDb = NULL;
if (sameWord(cartDb,"0"))
cartDb = NULL;
-if ((fromDb != NULL) && !sameOk(strLower(fromOrg), strLower(hOrganism(fromDb))))
+if ((fromDb != NULL) && !sameWordOk(fromOrg, hOrganism(fromDb)))
fromDb = NULL;
if ((toDb != NULL) && !sameOk(toOrg, hOrganism(toDb)))
toDb = NULL;
for (this = chainList; this != NULL; this = this->next)
{
if (sameOk(this->fromDb ,fromDb) && sameOk(this->toDb, toDb))
{
choice = this;
break;
}
double score = scoreLiftOverChain(this, fromOrg, fromDb, toOrg, toDb, cartOrg, cartDb, dbRank, dbDbHash);
if (score > bestScore)
{
choice = this;