f445b21b422aaf984db35718cb50611691210803 hiram Tue Feb 3 14:21:32 2026 -0800 adding a haplotypes item to the assemblyList table refs #34736 diff --git src/hg/lib/assemblyList.as src/hg/lib/assemblyList.as index f3d42ff976e..908be159bd1 100644 --- src/hg/lib/assemblyList.as +++ src/hg/lib/assemblyList.as @@ -2,16 +2,17 @@ "listing all UCSC genomes, and all NCBI assemblies, with search priority, and status if browser available or can be requested ( string name; "UCSC genome: dbDb name or GenArk/NCBI accession" uint priority; "assigned search priority" string commonName; "a common name" string scientificName; "binomial scientific name" uint taxId; "Entrez taxon ID: www.ncbi.nlm.nih.gov/taxonomy/?term=xxx" string clade; "approximate clade: primates mammals birds fish ... etc ..." string description; "other description text" ubyte browserExists; "1 == this assembly is available at UCSC, 0 == can be requested" string hubUrl; "path name to hub.txt: GCF/000/001/405/GCF_000001405.39/hub.txt" uint year; "year of assembly construction" string refSeqCategory; "one of: reference, representative or na" string versionStatus; "one of: latest, replaced or suppressed" string assemblyLevel; "one of: complete, chromosome, scaffold or contig" + string haplotypes; "related haplotype assembly when available, comma separated list for polyploid" )