5ef143858259d0bbb520098e036beb585d4285fc jcasper Sun Feb 8 01:11:19 2026 -0800 Installing updated hg.conf files from UCSC servers diff --git confs/asia.hg.conf confs/asia.hg.conf index 01d03294746..05b31e909a0 100644 --- confs/asia.hg.conf +++ confs/asia.hg.conf @@ -162,78 +162,60 @@ # HTTPS Certificate Check Settings are: abort warn log none httpsCertCheck=log # domains to whitelist, skip cert checking, space-separated list # presence of "noHardwiredExceptions" in the list here # turns off the hardwired whitelist exceptions in https.c httpsCertCheckDomainExceptions= # with wildcard for testing: #httpsCertCheckDomainExceptions=noHardwiredExceptions *.upf.edu *.igh.cnrs.fr *.med.umich.edu # Assembly-specific html (e.g. links to more info) GCA_009914755.4_html=<b><a target=_blank style='font-size:small; position: absolute; margin-left: 1em' href='/goldenPath/newsarch.html#041222'>What is human CHM13-T2T?</a></b> -# Adding parallel loading on files from /gbdb, refs #29819 -udc.localDir=/gbdb - # Adding curated hubs line by request from Jairo 09/26/22 curatedHubPrefix=public # show a message when hgTracks takes longer than X seconds to load warnSeconds=40 # new GA4 key analyticsKey=G-Z7QQFEZN0L # use new mouseovers instead of title tags showMouseovers=on # we trust trackDb to know what tables and files exist on this machine # so we won't check at start up trustTrackDb=on # limit memory to 20G maxMem=21474836480 # Increases the number of items that can be queried from a bigBed file bigBedMaxItems=100000 -# Enables the pop-up when clicking items option on the configure page -canDoHgcInPopUp=true - -# Enables the grouping feature for track hubs -trackHubsCanAddGroups=on - -# Adding more aggressive bot delay #35729 -newBotDelay=on - # Increases the number of items that can be queried from a BAM file BAMMaxItems=30000 # BLAT shows locus name of the match #35993 blatShowLocus=off # new flag for testing rm32751 turn on automatic creation of custom tracks from hgBlat results. autoBlatBigPsl=on -# Enables the gear and x icon for hgTracks -greyBarIcons=on - # Enables genark hubs to appear in assembly dropdowns for hgConvert/hgLiftOver genarkLiftOver=on # Enables approved hgLogin redirect login.approvedReturn=https://genome.ucsc.edu/,https://genome-euro.ucsc.edu/,https://genome-asia.ucsc.edu/ # Enables the QuickLift checkbox on hgConvert browser.quickLift=on # Additional settings for QuickLift quickLift.lengthLimit=100000 quickLift.insColor=64,127,0,64 quickLift.delColor=0,0,127,64 quickLift.doubleColor=127,127,127,64 quickLift.mismatchColor=255,0,0,64 - -# Enables single path loading for bigBed. Also, affects bigGenePred and bigPsl. -bigBedOnePath=on