61dc7885a5f1001e2bc189501379088f2b53379d galt Mon Feb 23 15:42:36 2026 -0800 fixes things found automated codereview. for bigBedCmdSupport lib moved slAddHead, removed stray debugmsg and fixed comment and added static keyword. fixed bigChainToChain chromFound = FALSE, removed stray test makefile, fixed existing typo "tines", and added a missing space after issing space before optionMultiVal(). refs #37146 diff --git src/hg/utils/bigGenePredToGenePred/bigGenePredToGenePred.c src/hg/utils/bigGenePredToGenePred/bigGenePredToGenePred.c index ba628e251e7..3677cc9f934 100644 --- src/hg/utils/bigGenePredToGenePred/bigGenePredToGenePred.c +++ src/hg/utils/bigGenePredToGenePred/bigGenePredToGenePred.c @@ -47,31 +47,31 @@ static struct optionSpec options[] = { {"chrom", OPTION_STRING}, {"start", OPTION_INT}, {"end", OPTION_INT}, {"bed", OPTION_STRING}, {"range", OPTION_STRING|OPTION_MULTI}, {"positions", OPTION_STRING}, {"udcDir", OPTION_STRING}, {"skipChromCheck", OPTION_BOOLEAN}, {NULL, 0}, }; static void processChromChunk(struct bbiFile *bbi, char *chrom, int start, int end, char *bedName, FILE *f) /* Output one chunk. Only blocks where start is in the range will be written - * to avoid outputting a block multiple tines. */ + * to avoid outputting a block multiple times. */ { char *chromName = chrom; int itemsLeft = 0; struct bigBedInterval *bbList = bigBedIntervalQuery(bbi, chromName, start, end, itemsLeft, lm); for(; bbList != NULL; bbList = bbList->next) { struct genePredExt *gp = genePredFromBigGenePred(chromName, bbList); genePredTabOut((struct genePred *)gp, f); } } void bigGenePredToGenePred(char *bigGenePredFile, char *genePredFile) /* bigGenePredToGenePred - convert bigGenePred file to genePred. */ { struct bbiFile *bbi = bigBedFileOpen(bigGenePredFile);