61dc7885a5f1001e2bc189501379088f2b53379d galt Mon Feb 23 15:42:36 2026 -0800 fixes things found automated codereview. for bigBedCmdSupport lib moved slAddHead, removed stray debugmsg and fixed comment and added static keyword. fixed bigChainToChain chromFound = FALSE, removed stray test makefile, fixed existing typo "tines", and added a missing space after issing space before optionMultiVal(). refs #37146 diff --git src/hg/utils/bigPslToPsl/bigPslToPsl.c src/hg/utils/bigPslToPsl/bigPslToPsl.c index 63503d3fcc8..a709c536589 100644 --- src/hg/utils/bigPslToPsl/bigPslToPsl.c +++ src/hg/utils/bigPslToPsl/bigPslToPsl.c @@ -55,31 +55,31 @@ {"chrom", OPTION_STRING}, {"start", OPTION_INT}, {"end", OPTION_INT}, {"bed", OPTION_STRING}, {"range", OPTION_STRING|OPTION_MULTI}, {"positions", OPTION_STRING}, {"collapseStrand", OPTION_BOOLEAN}, {"udcDir", OPTION_STRING}, {"skipChromCheck", OPTION_BOOLEAN}, {NULL, 0}, }; static void processChromChunk(struct bbiFile *bbi, char *chrom, int start, int end, char *bedName, FILE *f) /* Output one chunk. Only blocks where start is in the range will be written - * to avoid outputting a block multiple tines. */ + * to avoid outputting a block multiple times. */ { int itemsLeft = 0; char *chromName = chrom; struct bigBedInterval *bbList = bigBedIntervalQuery(bbi, chromName, start, end, itemsLeft, lm); for(; bbList; bbList = bbList->next) { struct psl *psl, *pslList = pslFromBigPsl(chromName, bbList, seqTypeField, NULL, NULL); for(psl=pslList; psl; psl = psl->next) { if (collapseStrand && (psl->strand[1] == '+')) psl->strand[1] = 0;