File Changes for chmalee

v496_preview2 to v496_base (2026-03-23 to 2026-03-30) v496

• src/hg/hgConvert/hgConvert.c
  • lines changed 11, context: html, text, full: html, text
    b5820fe28821425cd0703ba4d92bfb36d7abb8e6 Wed Mar 25 13:43:40 2026 -0700
    Fix hgConvert for genark toDb selections. Previously the toDb cgi variable was in a <select>, and so choosing a genark search result that wasn't in the pre-existing select submits the form with the old value. Now the <select> gets a separate variable name, and on choosing a result the toDb variable is updated appropriately. Also fix weird default chain selection, if the toDb is explicitly provided, then choose that chain if it exists rather than scoring all of them to find a 'default' choice, refs Braney email
• src/hg/js/autocompleteCat.js
  • lines changed 5, context: html, text, full: html, text
    4ab22d829bff96467e64331dad271bcb0bc84de1 Tue Mar 24 15:22:00 2026 -0700
    Force genark autocomplete results to send their genome identifier like GC[AF]_XXX as the db field to hgGateway back end, refs #37276
• src/hg/js/hgGateway.js
  • lines changed 15, context: html, text, full: html, text
    4ab22d829bff96467e64331dad271bcb0bc84de1 Tue Mar 24 15:22:00 2026 -0700
    Force genark autocomplete results to send their genome identifier like GC[AF]_XXX as the db field to hgGateway back end, refs #37276
  • lines changed 6, context: html, text, full: html, text
    c9714d23710a9089473f5caafe6ec01934755a11 Fri Mar 27 09:37:09 2026 -0700
    Save position ranges search on hgGateway to the recent positions stack, refs #34588
• src/hg/js/utils.js
  • lines changed 6, context: html, text, full: html, text
    4ab22d829bff96467e64331dad271bcb0bc84de1 Tue Mar 24 15:22:00 2026 -0700
    Force genark autocomplete results to send their genome identifier like GC[AF]_XXX as the db field to hgGateway back end, refs #37276
• src/hg/utils/hubCheck/hubCheck.c
  • lines changed 15, context: html, text, full: html, text
    86f72a48aa5e300161f9b14bcb15fa8499122838 Wed Mar 25 16:11:04 2026 -0700
    Fix array length calcuation for a chopByChar call that caused a segfault. Stop at 5 failing sequence names per genome to speed up checking, refs #37174