4e986673a37800eacf1d36309b0cd38564a4bb1f
max
  Wed Mar 25 07:55:59 2026 -0700
PromoterAI track scripts, docs, and makeDoc; remove unused primateAiToBigBed.py, refs #37278

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

diff --git src/hg/makeDb/scripts/promoterAiOverlaps.as src/hg/makeDb/scripts/promoterAiOverlaps.as
new file mode 100644
index 00000000000..b2859d35438
--- /dev/null
+++ src/hg/makeDb/scripts/promoterAiOverlaps.as
@@ -0,0 +1,18 @@
+table promoterAiOverlaps
+"PromoterAI overlap positions where transcripts disagree on score"
+    (
+    string chrom;        "Chromosome"
+    uint chromStart;     "Start position (0-based)"
+    uint chromEnd;       "End position"
+    string name;         "Gene name"
+    uint score;          "Score scaled 0-1000"
+    char[1] strand;      "Strand"
+    uint thickStart;     "Thick start"
+    uint thickEnd;       "Thick end"
+    uint reserved;       "Item RGB color"
+    string alt;          "Alternate allele"
+    lstring transcripts; "Ensembl transcript IDs (comma-separated)"
+    lstring scores;      "PromoterAI scores (comma-separated)"
+    float scoreDiff;     "Maximum score difference across transcripts"
+    string _mouseOver;   "Mouse over text"
+    )