75a3d3c5cf3525a7a25dfd53cdd765daf8e32cef
angie
  Fri Mar 20 11:06:36 2026 -0700
123 new lineages and slight tweaks to several existing lineage definitions.

diff --git src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv
index 29efd392dba..2b28ff782e2 100644
--- src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv
+++ src/hg/utils/otto/sarscov2phylo/pango.clade-mutations.tsv
@@ -1234,30 +1234,31 @@
 PH.1	MC.10.1.6 > G2144T,G12832A > G25352T
 MC.10.1.7	MC.10.1 > C17156T > A3948G
 PJ.1	MC.10.1.7 > C13694T,G22599C
 MC.10.1.8	MC.10.1 > G18960A,T28094A
 MC.10.2	MC.10 > A10323G > T13804C,T21864C,C22689A,T28924C
 MC.10.2.1	MC.10.2 > A23598G,G27706T > C16041N,G6454N,C18029N
 PE.1	MC.10.2 > A23598G,G27706T > C16041T,G6454T,C18029T > G23580C
 PE.1.1	PE.1 > C22326T
 PE.1.1.1	PE.1.1 > G22319C
 PE.1.2	PE.1 > G25012T
 PE.1.3	PE.1 > G2588A,T3836G
 PE.1.4	PE.1 > C2902T > C15342T,C27476T >  A22896C
 PE.1.4.1	PE.1.4  > G25088T
 PE.1.4.2	PE.1.4  > C8240T,G28109T
 PE.1.4.3	PE.1.4  > C21716A
+PE.1.4.4	PE.1.4  > A25589G > T28098C > C27294T > G25064A > C3817N,A7301N
 PE.1.5	PE.1 > C23709T
 PE.1.6	PE.1 > C11050T
 PE.1.7	PE.1 > C2902T >  A22896C  ,C27476T > G495A,C10626T,C23202A > T21426N,C29555N
 PE.2	MC.10.2 > A23598G,G27706T > C16041T,G6454T,C18029T > A2160G > C16260N
 PE.3	MC.10.2 > A23598G,G27706T > C16041T,G6454T,C18029T > C27476T > C29546A > C4794T,C29358T > C16608N,C29149N
 PE.4	MC.10.2 > A23598G,G27706T > C16041T,G6454T,C18029T > A25983C
 PE.4.1	PE.4 > C10789T,C27476T >  A22896C  > C3177T,C16111T
 MC.10.2.2	MC.10.2 > A6864G > T10033C
 QP.1	MC.10.2.2 > C10833T > T7402C > C17676T
 MC.10.2.3	MC.10.2 > C17746T,A25165C
 MC.11	KP.3 > A19722G > G15372T > C12616T > A13121T > C17430T
 MC.11.1	MC.11 > C22858T > C22329T
 MC.11.2	MC.11 > C186N > T25473C
 MC.11.3	MC.11 > A13616G
 MC.11.3.1	MC.11.3 > C5979T > A21661G > C23277T > T24910N
@@ -1895,53 +1896,76 @@
 BA.2.87	BA.2 >  T9866C  > C2790T > C18744T
 BA.2.87.1	BA.2.87 >  G23040A , A22995C  > A22206G > C541T,G542A,C2536T,C4012T,G4354T,T4379G,C5184T,C7296T,T7480C,C7764T,A10037G,C10702T,A11782G,C12008T,A12791C,C12896T,C15925T,C17644A,T19364C,C19698A,G21604A,G21786A,C21855T,T21939C,G22017T,G22132T,T22552C,A22812C,G22894T,T22896G,C22916A,T22942G,T23005G,C23423T,T23487G,A23598G,G23761A,C23934T,G23948C,A24369G,C25487A,T26311G,G26529A,C28045T,C28256T,T28474C,A28715G > C66N,A309N,G9190N,G15451N,C16575N,T23633N,C26833N
 BA.3	B.1.1 > C21846T > C23604A > A23063T > T22882G,C22995A,A23013C,C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,A23040G,A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C26270T,C26577G,G26709A,A28271T,C28311T > C21762T,G22898A > T670G,G4184A,C4321T,C9534T,G10447A,C12880T,C15714T,G22775A,C26060T,C26858T,A29510C > C832T,C11235T
 BA.3.1	BA.3 > C29311T > G3791A,C3792A,A22812C
 BA.3.2	BA.3 > C11620T > C193N,C2037T,G2281T,T4579A,C5907T,G6476T,C9886T,C10747T,A12095C,T13375C,C14649T,T15047C,C21588T,G21624C,C21639T,T21864C,T22032C,T22054A,C22077T,A22122C,C22313T,A22538G,G22577T,G22604C,G22770A,A22786T,G22865T,A22881G,T22896C,  A22898G  ,G22899A,C22916T,T22917G,T22942G,A22996C,G23012A,  C23013A,  G23040A  ,G23048A,  C23075T  ,G23149T,G23224T,G23311T,A23436G,T23485A,T23487G,G23522A,A23598G,C23625A,C23673T,A23946C,G24116A,C24117A,C24378T,C25114A,G25234A,G25699T,C25803T,A26275G,C26645T,A26771T,C27131T > G27382N,T27395N, A28996N
 BA.3.2.1	BA.3.2 >  C23604G ,C25047G > A14920N,C17502N,C28849N,G29140N
 RD.1	BA.3.2.1 > A14920G,C17502T,C28849T,G29140A > A10978G
 RD.1.1	RD.1 > G22241T
 RD.1.1.1	RD.1.1 > C29085T > C2143N,C5100N,T12629N
 RD.1.2	RD.1 > C29160T > A8755N,C12073N
 BA.3.2.2	BA.3.2 > G27382C,T27395A, A28996N > A22629C,G23285T > G1043N,C7173N,G26718N
 RE.1	BA.3.2.2 > G1043A,C7173T,G26718T > G944A > C2592T,T6856C > T1195N
 RE.1.1	RE.1 > T1195C > G336A,A10323G,C14293T > C19707N,C21595N,T25129N,C25413N
 RE.1.1.1	RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C18747T > C19156T > G2494N
 RS.1	RE.1.1.1 > G2494A > C4012T,C14889T
+RS.1.1	RS.1 > C11767T > T6661A
+RS.1.2	RS.1 > C11767T > C6190T,T12958C
+RS.1.3	RS.1 > C4891T
+RS.1.4	RS.1 > C10252T
+RS.2	RE.1.1.1 > G2494A > G6443A
+RS.3	RE.1.1.1 > G2494A > C3634T,G29449T > G24794T
+RS.4	RE.1.1.1 > G2494A > C28994T > T25159N
+RS.5	RE.1.1.1 > G2494A > C21638T,C25571G
 RE.1.1.2	RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C18747T > G4665A,C21707T
+SJ.1	RE.1.1.2 > C17985T,T21252C > G662T,G25244T > C6638N,C21691N,T22333N
 RE.1.1.3	RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C25047T
+RE.1.1.4	RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > A14224G > T3766N
+RE.1.1.5	RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C9693T
+RE.1.1.6	RE.1.1 > C19707T,C21595T,T25129C,C25413A > C22591T > C657T > C5835T
 RE.1.2	RE.1 > T1195C > C203T,C5654T,C9836T,C22594T,C28987T
 RE.2	BA.3.2.2 > G1043A,C7173T,G26718T > A3309G > C18582N,C19029N,A29221N
 RE.2.1	RE.2 > C18582T,C19029T,A29221G > C7000T,A16938G,C19154T,C22388T > C29160T > C1063N
 RE.2.1.1	RE.2.1 > C1063T > C4891T,T8803C
+SK.1	RE.2.1.1 > A16095G,A29086T
 RE.2.1.2	RE.2.1 > C1063T > C10594T > T25580C
-RE.2.1.3	RE.2.1 > C1063T > C10594T > C5184T > C24109N
+RE.2.1.3	RE.2.1 > C1063T > C10594T > C24109T > C5184T
+SL.1	RE.2.1.3 > C24771T
+RE.2.1.4	RE.2.1 > C1063T > C2023T,C23230T > C6471A > G10180N,C21658N
+RE.2.1.5	RE.2.1 > C1063T > C2023T,C23230T > C5144T,C16293T,C25339T
+RE.2.1.6	RE.2.1 > C1063T > C18431T > A5275N,C20313N
 RE.2.2	RE.2 > C18582T,C19029T,A29221G > C7000T,A16938G,C19154T,C22388T > C5884T,A10864G,C28791T
 RE.2.2.1	RE.2.2 > T1177C > G354A > C1663T
+SN.1	RE.2.2.1 > G7360T,C21638T
 RE.2.2.2	RE.2.2 > T1177C > G10997A,G11930A > C2902N,C17766N
 RU.1	RE.2.2.2 > C2902T,C17766T > C28928T > A3133N
 RE.2.2.3	RE.2.2 > T1177C > C11020T
+SM.1	RE.2.2.3 > G942A,G8612T,G19072A > C2773N
 RE.2.2.4	RE.2.2 > T1177C > C13255T,A25998G > C7764T
 RT.1	RE.2.2.4 > C21855T,G22081T > C1441N
+RT.2	RE.2.2.4 > C16948T
 RE.2.2.5	RE.2.2 > C4438T
 RE.2.2.6	RE.2.2 > G3259T
 RE.2.2.7	RE.2.2 > T1177C > G354A > A22461G
 RE.2.2.8	RE.2.2 > T1177C > C10726T > C24042T
+RE.2.2.9	RE.2.2 > T17007C
 RE.2.3	RE.2 > C18582T,C19029T,A29221G > C7000T,A16938G,C19154T,C22388T > A10864G > G12268A > C8208A,C12459T > C3784N,C3817N,C14029N
 RE.2.4	RE.2 > C18582T,C19029T,A29221G > C28651A
+RE.2.5	RE.2 > C18582T,C19029T,A29221G > C7000T,C19154T,C22388T > A16938G > A18558G,G21452A,C24370T > C8043T,C8619T,C10776T > G21898N
 RE.3	BA.3.2.2 > C19718T
 RE.3.1	RE.3 > C11651A,C18508T > T13902N,C23086N
+RE.4	BA.3.2.2 > G1043A,C7173T,G26718T > G24812T,C29171T > G488N,C3176N,T4888N,C5167N,A14283N,C19018N,C19572N,G20995N,C22388N,C29144N
 BA.4_dropout	B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > T670G,G4184A,C4321T,C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G > A22786C > A22688G > A29510C > C10198T > C2790T > C28724N > G12160A > G27788N > T22917N > T23018G
 BA.4	B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > T670G,G4184A,C4321T,C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G > A22786C > A22688G > A29510C > C10198T > C2790T > C28724T > G12160A,G27788T > T22917G > T23018G
 BA.4.1	BA.4 > T21570G
 BA.4.1.1	BA.4.1 > A23570G
 BA.4.1.2	BA.4.1 > C14407T > C27644T,C29686N > C3176T
 BA.4.1.3	BA.4.1 > C28435T > C11758T > A2435G
 BA.4.1.4	BA.4.1 > G25266T
 BA.4.1.5	BA.4.1 > C20762T
 BA.4.1.6	BA.4.1 > C13329T
 BA.4.1.7	BA.4.1 > C17439T > A18941G > A6084G > A21717G > C26885T > C14407T
 BA.4.1.8	BA.4.1 > C28720T > C14322T,T18603C > G22599C
 BA.4.1.9	BA.4.1 > G22599C
 BA.4.1.10	BA.4.1 >  G29179A > G25538T > A22622G > G22599C
 CS.1	BA.4.1.10 > C29784N > C6070T,G17259C > A22893G
 BA.4.1.11	BA.4.1 > G29179A > T22896C > C10615T,C27389T,C27476T > T15978C > G22599C > A22001G,A27946T
@@ -3713,101 +3737,135 @@
 NB.1.8.1_no15960	NB.1 > G14290T > C5878T > C823T,G2095A,C23039G,T29164C > G22865T
 NB.1.8.1	NB.1 > G14290T > C5878T > C823T,G2095A,C23039G,T29164C > C15960T,G22865T
 PQ.1	NB.1.8.1 > T16456C
 PQ.1.1	PQ.1 > G28884C > T5143N
 PQ.1.2	PQ.1 >  T22995C
 PQ.1.3	PQ.1 > C5526T > C11986N,C18252N,C29296N
 PQ.1.4	PQ.1 > G14131A > C24912T
 PQ.1.5	PQ.1 > C7299T > C25156T
 PQ.1.6	PQ.1 > G14131A > C21904T > T6954C
 PQ.1.6.1	PQ.1.6 >  T22995C
 PQ.2	NB.1.8.1 > T25969C
 PQ.2.1	PQ.2 >  T22995C
 PQ.2.1.1	PQ.2.1  > C10969T,C18814T > C21191T
 PQ.2.1.2	PQ.2.1  > C10969T,C18814T > G23593C > A9698N,C11195N,C27612N
 PQ.2.1.3	PQ.2.1  > C19263T
+SH.1	PQ.2.1.3 > T2080C > T1330C > T2996G > T8296N,C10252N,C10747N,T24529N,T25099N
 PQ.2.1.4	PQ.2.1  > C2788T
 PQ.2.1.5	PQ.2.1  > T24194C
 PQ.2.1.6	PQ.2.1  > C7420T
 PQ.2.1.7	PQ.2.1  > C20762T
+RZ.1	PQ.2.1.7 > A17008G > A22896C > T5179N,G10261N,C10702N,T11725N,C24082N
+RZ.2	PQ.2.1.7 > A22029T > C11962N,C29358N
+RZ.2.1	RZ.2 > C11962T,C29358T > G22599C > C5314N,A11576N,C15720N,C26885N
 PQ.2.1.8	PQ.2.1  > C13436T,G16741T,C20543T > T23386C
 PQ.2.1.9	PQ.2.1  > C10369T
 PQ.2.1.10	PQ.2.1  > C27149T
 PQ.2.1.11	PQ.2.1  > C24422T > T23600C,C24034T
 PQ.2.1.12	PQ.2.1  > C6268T,T6376C
+PQ.2.1.13	PQ.2.1  > C21855T,T22016A > A6551N,T11737N,A11908N,C24370N,C25521N,C26768N,C28708N
+PQ.2.1.14	PQ.2.1  > T10612G
+PQ.2.1.15	PQ.2.1  > C16376T > A5353N
+PQ.2.1.16	PQ.2.1  > T20571C > T24235C,G25352T
+PQ.2.1.17	PQ.2.1  > A5235G > C6926T > T15870C,G22132T > C829N
 PQ.2.2	PQ.2 > A24825G
 PQ.2.3	PQ.2 > T20310C > G23593C
 PQ.2.4	PQ.2 > T17449C > T2680C
 PQ.2.4.1	PQ.2.4 > G21893A > A15367G
 PQ.2.4.2	PQ.2.4 >  T22995C
 PQ.2.4.3	PQ.2.4 > C9246T
 PQ.2.4.4	PQ.2.4 > C11514T
 PQ.2.5	PQ.2 > T25451C
 PQ.2.5.1	PQ.2.5 > A23157G
 PQ.2.5.2	PQ.2.5 > C1912T
 RQ.1	PQ.2.5.2 > C13019T > A22994G > G1820A,G14632A
 RQ.2	PQ.2.5.2 >  A22896C ,C25350T > C1471N,C4331N,T19955N
 PQ.2.5.3	PQ.2.5 > A17993G > G29449N
 PQ.2.5.4	PQ.2.5 > G25455T
 PQ.2.5.5	PQ.2.5 > C398T,G22599C,C26607T > G6352N,C19029N
 PQ.2.6	PQ.2 > T15366C > G8813A,G22899C,G29348T
 PQ.2.7	PQ.2 > C28603T
 PQ.2.7.1	PQ.2.7 > A23614G > A22004C > C4084N,T17838N
 PQ.2.8	PQ.2 > C8344T
 PQ.2.8.1	PQ.2.8 >  A22896C  > G26828N
 RC.1	PQ.2.8.1 > G26828T >  T22995C
 RC.2	PQ.2.8.1 > G26828T > A3138G > C28603N
 RC.2.1	RC.2 > C28603T > C23601A
 RC.3	PQ.2.8.1 > G26828T > C21952T
 RC.4	PQ.2.8.1 > G26828T > T3802C
+RC.5	PQ.2.8.1 > C2226T
+RC.6	PQ.2.8.1 > G26828T > C1263T > C23601A > C15026N
+RC.7	PQ.2.8.1 > G26828T > C5784T > T15597N
+RC.7.1	RC.7 > T15597C > C22329T
+RC.7.1.1	RC.7.1 > G23612A > T6082N,A8062N,T10123N,G13379N
+RC.8	PQ.2.8.1 > C3602T
+RC.9	PQ.2.8.1 > C26882T
+RC.10	PQ.2.8.1 > G26828T > A6204G,C6432T
 PQ.2.8.2	PQ.2.8 > G22427A > C21191N,C27509N
 PQ.2.9	PQ.2 > C18814T
 PQ.2.10	PQ.2 > T13668C,A27894G
+PQ.2.10.1	PQ.2.10 > G25483A > C21008T,C25463G > A23598G > T826N,C5575N,C6317N,A18702N,C27970N
 PQ.2.11	PQ.2 > C5806T > T10771C > A13703G > T5179N
 PQ.2.11.1	PQ.2.11 > T5179A > T4640C, T22995C
+PQ.2.12	PQ.2 > T712A
+PQ.2.12.1	PQ.2.12 > G22899C > C15277N,C16596N,C17439N
+PQ.2.13	PQ.2 > C27513T
+PQ.2.13.1	PQ.2.13 > G1820A > C22224T,G22899C > A1632N
+PQ.2.14	PQ.2 > C16293T
+PQ.2.14.1	PQ.2.14 > C14583T > C18555T,A23598G >  T22995C  > A25718N,C25886N,C26645N,C26807N
 PQ.3	NB.1.8.1 > C29171T > G29234A
 PQ.4	NB.1.8.1 > C2842T
 PQ.4.1	PQ.4 > C23277T,  G23599C  > T22558N,C25614N,T29685N
 PQ.4.2	PQ.4 > C11833T > C21742T > G23126C
 PQ.4.3	PQ.4 > C11833T > C21742T > G22139T
 PQ.4.4	PQ.4 > A11319G
 PQ.4.5	PQ.4 > C3177T
 PQ.4.6	PQ.4 > G15919A > C10702N
 PQ.4.6.1	PQ.4.6 > C10702T > G22899A > G8114N,C9532N,C16575N
 PQ.4.6.2	PQ.4.6 > C10702T > G27915T > T2680N,C5178N,T20391N,C23248N
 RJ.1	PQ.4.6.2 > T2680C,C5178A,T20391G,C23248T > C20589T,A22012C,G28079T
 PQ.4.7	PQ.4 > C11833T > G13960A
 PQ.4.8	PQ.4 > A17409G > C26013T
 PQ.4.9	PQ.4 > G2534T,C5055T > A3979N,T16939N
 PQ.4.10	PQ.4 > C11833T > C21742T > C20235T > T21820C > A5536G
 PQ.4.10.1	PQ.4.10 > G25352T
+RY.1	PQ.4.10.1 > C28657T >  T22995C  > T3499N
+RY.1.1	RY.1 > T3499C > G373A,C1616T,C7945T, G19326A  > C23202T > A13355N
 PQ.5	NB.1.8.1 > C25672T
 PQ.5.1	PQ.5 > G25687T > C28153T > C25517T > C7564N,C12781N
 PQ.5.1.1	PQ.5 > G25687T > C28153T > C25517T > C7564T,C12781T > A22012T
 PQ.5.1.2	PQ.5 > G25687T > C28153T > C25517T > C7564T,C12781T > T5834G > A24461G
 PQ.6	NB.1.8.1 > C15720T
+PQ.6.1	PQ.6 > C23277T
+PQ.6.1.1	PQ.6.1 > C29272T >  T22995C  > C1684N
 PQ.7	NB.1.8.1 > C1191T
 PQ.8	NB.1.8.1 > C25836T
 PQ.8.1	PQ.8 >  T22995C  > C186N
+PQ.8.1.1	PQ.8.1 > C186T > C4543T > A13288G
+PQ.8.1.2	PQ.8.1 > C186T > T24472C
+PQ.8.1.3	PQ.8.1 > C186T > T14781C > C15120T,C15720T
+PQ.8.1.4	PQ.8.1 > C619T
 PQ.9	NB.1.8.1 > T15843A > C22987T
 PQ.9.1	PQ.9 >  T22995C  > T11223N
 PQ.9.1.1	PQ.9  > T11223C > C8240T >  G23604A  ,T24377C
 PQ.10	NB.1.8.1 > T7492C
 PQ.10.1	PQ.10 >  T22995C
 PQ.10.1.1	PQ.10.1  > C22224T > A13712N
 PQ.10.1.2	PQ.10.1  > C22082T
 PQ.10.1.3	PQ.10.1  > G25699T > C8386N
+SA.1	PQ.10.1.3 > C8386T > C27549T > C22419T
+SA.1.1	SA.1 > A12075G > A22896C
 PQ.10.1.4	PQ.10.1  > G1820T
 RH.1	PQ.10.1.4 > C13011T > A23267G,G25352T > T334N
 PQ.11	NB.1.8.1 > A3951G > C14599N
 PQ.12	NB.1.8.1 > C13968T
 PQ.13	NB.1.8.1 > T13764C
 PQ.13.1	PQ.13 >  T22995C  > C1213N
 PQ.13.2	PQ.13 > C20031T > G2035T,G3563A,G9203A,C23601T
 PQ.13.3	PQ.13 > C16293T,C25416T
 PQ.13.3.1	PQ.13.3 > C23277T > T29410N
 PQ.14	NB.1.8.1 > C3619T
 PQ.14.1	PQ.14 > A532G
 PQ.14.1.1	PQ.14.1 > T11371C,A16311G,  T22995C  > G22696N
 PQ.14.2	PQ.14 > C28603T > C12664T
 PQ.14.3	PQ.14 > C28603T > C26607T
 PQ.14.3.1	PQ.14.3 > A23598G
@@ -3821,76 +3879,90 @@
 PQ.17.2.1	PQ.17.2 > C1102G > C13035N
 PQ.17.3	PQ.17  > C23601T
 PQ.17.4	PQ.17  > G23610A
 PQ.17.5	PQ.17  > A20658G > C29108T > C14818N
 PQ.17.6	PQ.17  > G25606T
 PQ.17.7	PQ.17  > A21343G
 PQ.17.7.1	PQ.17.7 > C23601T > A26046N
 PQ.17.7.2	PQ.17.7 > A26046G >  A22896C  > T6572N
 RK.1	PQ.17.7.2 > T6572C > G22820A
 PQ.17.8	PQ.17  > T12946C,C27813T,C28748T > C23664T > C23987T
 PQ.17.9	PQ.17 > T15009C > C26111T
 PQ.17.10	PQ.17 > T4441C
 PQ.17.10.1	PQ.17.10 > C23277T
 PQ.17.11	PQ.17 > C23277T
 PQ.17.11.1	PQ.17.11 > C28603T > G22599A,G25726A
+PQ.17.11.2	PQ.17.11 > C28603T > C27092A > T8176N,G11250N,T12113N,A24205N
+PQ.17.11.3	PQ.17.11 > A3915G,C8895T,T22118C > A14010N,C14407N,T16743N,C17745N,G26062N,C28000N
+PQ.17.12	PQ.17 > G22599C,C27476T > C5866N,C28651N
+PQ.17.12.1	PQ.17.12 > C15546T > G23522A
 PQ.18	NB.1.8.1 > C23601T
 PQ.19	NB.1.8.1 > A21713G > G22599A
 PQ.20	NB.1.8.1 > G22104C
 PQ.21	NB.1.8.1 > G22289T > G9010N
 PQ.22	NB.1.8.1 >  G23604A
 PQ.23	NB.1.8.1 > C23625T
 PQ.24	NB.1.8.1 > T22191C > A28049N
 PQ.25	NB.1.8.1 > T24903C > C28957N
 PQ.25.1	PQ.25 > T29524C
 PQ.25.2	PQ.25 > C28957T > C875T, T22995C  > C1594N,C18175N,C28651N
 PQ.25.3	PQ.25 > C28957T > C22498T
 PQ.25.3.1	PQ.25.3 > C21846T
 PQ.26	NB.1.8.1 > T28340C
 PQ.27	NB.1.8.1 > C18555T > A22320T
 PQ.28	NB.1.8.1 > C21855T
 PQ.29	NB.1.8.1 > A29700G > G2840A,A15667C,G17794A,  A22896C
 PQ.30	NB.1.8.1 > C17550T > T760C,C2110T,C6538T,A9109G,C11355T > C25693T
 PQ.31	NB.1.8.1 > C19662T > C23896T
 PQ.31.1	PQ.31 >  T22995C
+PQ.31.1.1	PQ.31.1 > A3959G,A23598G > T16059N
+SG.1	PQ.31.1.1 > T16059A > C22432T > G24857A > C346N,C16954N,C25069N,C27131N
+PQ.31.2	PQ.31 > C25515A
+PQ.31.3	PQ.31 > C9510T > T28672N
+PQ.31.3.1	PQ.31.3 > T28672C > G11335T > C556T,T17364C,G25352T,C28054T >  T22995C  > C6706N
+PQ.31.4	PQ.31 > C17746T
 PQ.32	NB.1.8.1 > C23277T
 PQ.33	NB.1.8.1 > G2324A > C11668T
 PQ.34	NB.1.8.1 > G23610A
 PQ.34.1	PQ.34 > C23277T
 PQ.35	NB.1.8.1 > C25844T
 PQ.36	NB.1.8.1 > T13120C
 PQ.37	NB.1.8.1 > G6446T,C26607T > T23600C
 PQ.38	NB.1.8.1 > C27513T > C5784T
 PQ.39	NB.1.8.1 >  A22896C
 PQ.39.1	PQ.39  > G23593C
 PQ.40	NB.1.8.1 >  T22995C  > C19983T > G22203T,C23230A > A3942N,C6720N,C11479N,C14184N,C28310N
 PQ.41	NB.1.8.1 > G25352T > C29627T
 PQ.41.1	PQ.41 > A2871G > A2568G
 PQ.41.1.1	PQ.41.1 > G22599C, A22896G  > C18646N,T19401N,T24793N
 PQ.42	NB.1.8.1 > T26491C,A26492T,T26497C >  T22995C  > C22088T,C23277T > C23896N,T24437N,T25969N
 PQ.43	NB.1.8.1 > G24928T
 PQ.43.1	PQ.43 > A10558G > T27811C
 PQ.43.1.1	PQ.43.1 >  T22995C
+SF.1	PQ.43.1.1 > T25510C > G5194N
+SF.1.1	SF.1 > G5194T > G25785C > C5173N
 PQ.43.2	PQ.43 > G25440T
 PQ.44	NB.1.8.1 > C3170T
 PQ.45	NB.1.8.1 > C6031T
 PQ.46	NB.1.8.1 > C745T
 PQ.46.1	PQ.46 > C2574T > C25904T > C27247N
 PQ.47	NB.1.8.1 > G22899A > G7027T > T11176N,C12970N
 PQ.48	NB.1.8.1 > C12789T
 PQ.48.1	PQ.48 > G23593C
 PQ.49	NB.1.8.1 > C28657T
+PQ.50	NB.1.8.1 > C29555T
+PQ.50.1	PQ.50 > G26690A >  T22995C
 NB.1.9	NB.1 > G14290T > C11824T > C25267T >  A22896C
 NB.1.10	NB.1 > G14290T > C23601T
 NB.1.11	NB.1 > G14290T > G28817T > A3752G,G24434T
 NB.1.12	NB.1 > G14290T > C2135T > C8334T,  A22896C
 NB.1.13	NB.1 > G14290T > C2388T > G3896T,  A22896C  > C7735N,C22570N,C23248N,C24382N
 XDV.1.6	XDV.1 > G5612A > C26882T > C4551T,C21871T,G22349A > G3892T,  A22995C > C9985N
 XDV.1.7	XDV.1 > C8950T > G9203A
 XDV.1.7.1	XDV.1.7 > C5173T > C21627A,G21746T > C8683T
 PN.1	XDV.1.7.1 > C2306T > C2037T,  A22995C  > G26262N
 XDV.1.7.2	XDV.1.7 > C28606T > C29370T > T11075C
 XDV.1.7.3	XDV.1.7 > C5173T > A11462G,T27522G > G21753T > A2693N
 XDV.1.7.4	XDV.1.7 >  A22995C  > C5654A
 XDV.1.7.5	XDV.1.7 > C1812T > C7600N,T8323N
 XDV.1.8	XDV.1 > T2551C > T9892G
 XDV.1.9	XDV.1 > C6855T
@@ -4052,31 +4124,31 @@
 XEK.6	XEK > C593T > A25026T
 XEK.7	XEK > C593T > C27429T
 XEK.7.1	XEK.7 > G22599C > C19032N
 XEK.8	XEK > C593T > C23277T
 XEL	JN.1.18.6 > C21627A > C19716T > C6701T > T25510C > C29311N
 XEL.1	JN.1.18.6 > C21627A > C19716T > C6701T > T25510C > C29311T > C1960T > G25352T
 XEL.2	JN.1.18.6 > C21627A > C19716T > C6701T > T25510C > C29311T > C11681T > G22037A > C22594N
 XEL.3	JN.1.18.6 > C21627A > C19716T > C6701T > T25510C > C29311T > C19029T > C3177T
 XEL.4	JN.1.18.6 > C21627A > C19716T > C6701T > T25510C > C29311T > C23601T > G22132T > C1426N
 XEL.5	JN.1.18.6 > C21627A > C19716T > C6701T > T25510C > C29311T > T2022C > T22092C
 XEL.6	JN.1.18.6 > C21627A > C19716T > C6701T > T25510C > C29311T > A22994G
 XEM	JN.1 > T23008N,T23010N >         G24872T >           T22928C > C23039G > C25006T > G28884C > C28291A > C23202A,T25652C > C25803T > T21738C,G22599C,C23422T
 XEN	B.1.1 >           A23063T > T22882G,                C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,T22896A,G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T23008N,T23010N > G17334T,G24872T > C7113T > T22928C >           G22599C > C20104T > C21654T >  C22995C  > G25429T,C26195T > T10093G,C21627A > C25587N,A26927N
 XEN.1	XEN > C25587T,A26927G > G23610A > C29200N
 XEN.2	XEN > C25587T,A26927G > T23427C > C20148N
-XEP	KP.3 > A19722G > G15372T > C12616T > A13121T > C25006T > C28291A > G28884C > G22865T > C3961T,C20594T,C25721T,C28720T
+XEP	KP.3 > A19722G > G15372T > C12616T > A13121T > C25006T > C28291A > G28884C > G22865T > C3961T,A4364C,C20594T,C25721T,C28720T
 XEP.1	XEP > A4364C > C8950T,C9286T
 XEP.1.1	XEP.1 > G22599C
 XEP.2	XEP > A4364C > T14619C
 XEP.3	XEP > A4364C > C28511A > A25806N
 XEQ	JN.1.18.6 > C21627A > C19716T > C6701T > G24872T > G16943T > T12418C > C23039G
 XER	JN.1.16.1 > G22132T > T21653C,A22107G,C22792T,A22893G,C22993T,T28297C > C21627A > C1426T,C18348T
 XES	KP.3 > G28884C > C28291A > C25006T >          C4891T,C5310T,C6471A,A18642C,C22000A > C2334N
 XES.1	XES > G22599C > C19011N
 XES.1.1	XES > G22599C > C19011T > G23126C > C1404N
 XET	JN.1.11.1 >                     C20104T > C13487T > C346T > C5907T > C23039G > G12647A,G25352T > G12322N
 XEU	JN.1 > T23008N,T23010N >         G24872T >          T22928C > C23039G > G28884C > C25006T >           C18657T,C19716T,C21627A,T21738C >          T24376C > T27995C > C593T,C3505T,G24193T > A28291N
 XEV	XEC > C7113T > C12616T > C1684A > G28378T
 XEW	XEC > C7113T > C12616T > A13121T > T24376C
 XEY	XEC > C7113T > C12616T > A13121T > G15372T > G17334T > C2110A,C17745T,C25416T
 XEZ	XEC > C7113T > C12616T > A13121T > G15372T > C2570T,C6312T,G6536A
@@ -4108,33 +4180,38 @@
 XFC.3.2	XFC.3 > T27484C,C28519T > G6694A,C27247T >  A22995C  ,C25792T
 XFC.3.3	XFC.3 > T27484C,C28519T > G6694A,C27247T > C20759T
 XFC.3.3.1	XFC.3.3 > G21786T
 XFC.3.3.2	XFC.3.3 > C22986T > T3313N
 XFC.3.4	XFC.3 > T27484C,C28519T > G6694A,C27247T > C17733T
 XFC.3.5	XFC.3 > T27484C,C28519T > G6694A,C27247T > G17427A
 XFC.4	XFC > A1393G,C15720T
 XFD	KP.3.1.1 > C25006T > C28291A > C21627A,T21738C > G28884C > A687G,G2755T,T7228C,C17028T,C28807T > C593T
 XFE	KP.3.1.1 > C25006T > C28291A > C21627A,T21738C > G28884C > A2207G,C7609T,C8320T,G13025T,C18864A,C27600T
 XFF	B.1.1 >           A23063T > T22882G,                C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,T22896A,G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > G26660T >          T22928C > A29408G > C29362T > T26171C > G25352T > C18131T,G22111T,G22599C
 XFF.1	XFF > G22865T > C14925N
 XFG	B.1.1 >           A23063T > T22882G,C22995A,        C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,        G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G,        T28297C > C8818T,C22792T,A22893G > C21627A > C29409T > T4214C,T8350C, T22896G ,A23021G,C23039G,C23277T
 XFG.1	XFG > G22896C > T16224N,T25479N,C27416N
 XFG.1.1	XFG.1 > T16224C,T25479C         > G21850T > C6696T >  N27416C  > G26832T > A19326N,C29215N
 XFG.1.1.1	XFG.1.1 > A19326G,C29215T > G25855T > G27430T
-XFG.1.1.2	XFG.1.1 > G25855T > C23625T > G18105N
 RP.1	XFG.1.1.1 > C2065T > A16890G > A24999G
 RP.2	XFG.1.1.1 > C22482T
+XFG.1.1.2	XFG.1.1 > A19326G,C29215T > G25855T > C23625T > G18105N
+XFG.1.1.3	XFG.1.1 > A19326G,C29215T > G25855T > G22030C > C8713N,C15026N,T25514N,G27798N
+XFG.1.1.4	XFG.1.1 > A19326G,C29215T > G25855T > G18394A
+XFG.1.1.5	XFG.1.1 > A19326G,C29215T > G25855T > C1889T
+XFG.1.1.6	XFG.1.1 > A19326G,C29215T > G25855T > T28009C
+XFG.1.1.7	XFG.1.1 > A19326G,C29215T > G25855T > A21137G > C4084N,C9226N,C16308N
 XFG.1.2	XFG.1 > T16224C,T25479C,C27416T > G21850T > C6696T > C16111T
 XFG.1.3	XFG.1 > T16224C,T25479C,C27416T > G21850T > C6696T > A27421G > C6730N,C11962N
 XFG.2	XFG > C20178T > C2065T,C6541T,T24283C,G29081T > A21137G
 XFG.2.1	XFG.2 > G25445T > C24771T > C8099N
 XFG.2.2	XFG.2 > G3302A > C25350T
 XFG.2.3	XFG.2 > G27621A
 XFG.2.3.1	XFG.2.3 > A22812C
 XFG.2.4	XFG.2 > C22088T > C19602N
 XFG.2.5	XFG.2 > A27853T
 XFG.2.5.1	XFG.2.5 > G14186A,G20342T > G3250T,G22567T,C28087T > A22812C
 XFG.2.6	XFG.2 > C29311T
 XFG.2.7	XFG.2 > C4897T
 XFG.2.7.1	XFG.2.7 > T1570C,T27546C > T18099A > A2410G
 XFG.2.7.2	XFG.2.7 > T14415C > C19572T > C25607T
 XFG.2.8	XFG.2 > C13426T > C26091T
@@ -4156,224 +4233,258 @@
 QK.3	XFG.3.1.2 > G21586T
 QK.4	XFG.3.1.2 > A13949G > C6318T
 XFG.3.1.3	XFG.3.1 > T17454C > T29026C
 XFG.3.1.4	XFG.3.1 > T17454C > A22330G,G24368T > G18803T
 XFG.3.1.5	XFG.3.1 > T17454C > G22484T
 XFG.3.1.6	XFG.3.1 > T17454C > A25439G
 XFG.3.1.7	XFG.3.1 > T17454C >  G22688T  > C21646T > G22364N,G25563N
 XFG.3.1.8	XFG.3.1 > T17454C > T9412C > G3251A,C21859T > C3984T
 XFG.3.1.9	XFG.3.1 > T17454C >  T29409C
 XFG.3.1.10	XFG.3.1 > T17454C > C5167T,C23673T
 XFG.3.1.11	XFG.3.1 > T17454C > C1288T > C29119T
 XFG.3.1.12	XFG.3.1 > T17454C > A5560G
 XFG.3.2	XFG.3 > C4763T,G6404A
 XFG.3.3	XFG.3_10615 > C23601T
 XFG.3.3.1	XFG.3.3 > C6449T
+SE.1	XFG.3.3.1 > C4551T > G29449N
+SE.2	XFG.3.3.1 > C13264T
+SE.2.1	SE.2 > C311A > G22865T,A23156G > C14937N
 XFG.3.3.2	XFG.3.3 > C1426T,C4331T,C10718A
 XFG.3.3.3	XFG.3.3 > G12569A,G22567T
 XFG.3.4	XFG.3_10615 > T28822G > C18885T
 XFG.3.4.1	XFG.3.4 > T15762C > T23600C
 QF.1	XFG.3.4.1 > C3695T,C9979T > T22293C
 QF.1.1	QF.1 > G28090T
 QF.1.1.1	QF.1.1 > G13998A > C25083T
 QF.2	XFG.3.4.1 > C27812T
 QF.2.1	QF.2 > T898C > T23485A
 QF.2.2	QF.2 > G29044A
 QF.2.2.1	QF.2.2 > C25214T > A22538G
+SD.1	QF.2.2.1 > G20578T
+SD.1.1	SD.1 >  T22792C  > T7441C,C20148T
+QF.2.2.2	QF.2.2 > C25214T > C26873T
 QF.2.3	QF.2 > T898C > C13247T
 QF.2.4	QF.2 > T898C > C21811T
+QF.2.5	QF.2 > C23191T
+QF.2.6	QF.2 > C27849T
 QF.3	XFG.3.4.1 > C6027T
 QF.4	XFG.3.4.1 > C28651T > C15960A
 QF.5	XFG.3.4.1 > C5284T
 QF.5.1	QF.5 > C23673T > C18175N
 QF.6	XFG.3.4.1 > G24434T
 QF.7	XFG.3.4.1 > G25606A
+QF.7.1	QF.7 > C23673T
 XFG.3.4.2	XFG.3.4 > G1379A
 QT.1	XFG.3.4.2 > C3817T
 QT.1.1	QT.1 > C18377T > T23600C
 QT.1.2	QT.1 > C18377T > C6005A,C27752T
 QT.2	XFG.3.4.2 > T6023C,A23148G,G28681T > T28648N
 QT.3	XFG.3.4.2 > A23598G
 XFG.3.4.3	XFG.3.4 > T15762C > T24289A
 QS.1	XFG.3.4.3 > C8419T
 QS.2	XFG.3.4.3 > A23598G
 XFG.3.4.4	XFG.3.4 > T15762C > T8566C > G15025A,G28727T > T26106N
 XFG.3.4.5	XFG.3.4 > T23600C > C25083T,G28287A
 XFG.3.4.6	XFG.3.4 > C15763T
 RN.1	XFG.3.4.6 > C26822T > C25708T > G1820A
 RN.2	XFG.3.4.6 > C28344T
 RN.2.1	RN.2 > A23598G > C3096N,G21255N,T28933N
 XFG.3.4.7	XFG.3.4 > T580A > C19972T
 XFG.3.4.8	XFG.3.4 > C29200T
 XFG.3.4.9	XFG.3.4 > G8561T
 XFG.3.5	XFG.3_10615 > A19540G
 XFG.3.5.1	XFG.3.5 > C18421T > C23625T
 XFG.3.5.2	XFG.3.5 > C23601T
 XFG.3.6	XFG.3_10615 > C9521T
 XFG.3.6.1	XFG.3.6 > C5178T > C18463T > G24386T > C19983N,C26111N
 XFG.3.6.2	XFG.3.6 > C5055T,A18836G,C28863T > A11947N
+XFG.3.6.3	XFG.3.6 > T16035C
+SP.1	XFG.3.6.3 > C19983T
+SP.2	XFG.3.6.3 > G2167T,T3613C,C20470A > C13730N,G19684N,C29065N
+SP.2.1	SP.2 > C13730T,G19684T,C29065T > C5284T,T6118C > C15240T > A23598G
+XFG.3.6.4	XFG.3.6 > T23485A > C2455N,T22702N
 XFG.3.7	XFG.3_10615 > C25546T
 XFG.3.7.1	XFG.3.7 > C23601T > T28382N,C10030N
 XFG.3.8	XFG.3 > A25448G
 XFG.3.8.1	XFG.3.8 >  C3565T  > T23427C > C29518N
 XFG.3.9	XFG.3_10615 > T7999C
 XFG.3.9_23600	XFG.3.9 > T23600C
 XFG.3.10	XFG.3_10615 > C27893T
 XFG.3.10.1	XFG.3.10 > T3616C,C6445T,A29125G
 XFG.3.10.2	XFG.3.10 > A20461G > A13533N
 XFG.3.11	XFG > C10615T > C13608T > C15738T
 XFG.3.12	XFG > C10615T > C13608T > C556T
 XFG.3.12.1	XFG.3.12 > G29717A > C1943T,  G22688T  > C4900N
 XFG.3.13	XFG.3 > C10277T > G24398A
 XFG.3.13.1	XFG.3.13 > A12490G > G24095T
 XFG.3.13.2	XFG.3.13 > A12490G > G12080T
 XFG.3.14	XFG.3_10615 > C6031T,C23673T
 XFG.3.15	XFG.3_10615 > G28681A
 XFG.3.15_23600	XFG.3.15 > T23600C
 XFG.3.16	XFG.3_10615 > C25096T >  C3565T
 XFG.3.16.1	XFG.3.16 > G21753T > G15627N
 XFG.3.17	XFG.3 > C10993T,C16260T
+XFG.3.17.1	XFG.3.17 > A25841G > A929G
+XFG.3.17.2	XFG.3.17 > A25841G > C7267T,C12733T > C26907T
 XFG.3.18	XFG.3_10615 > C11866T
 XFG.3.18.1	XFG.3.18 > A28070C > G24095T
 XFG.3.19	XFG.3 > C2143T
 XFG.3.20	XFG.3 > C6040T
 XFG.3.21	XFG.3 > G2185A
 XFG.3.22	XFG.3 > G2273A,C2455T
 XFG.3.23	XFG.3_10615 > C3096T
 XFG.3.24	XFG.3_10615 > A15189G
 XFG.3.25	XFG.3_10615 > C6310T > C6539T > C25416T,T25557C > C22883A,C28344T > C643N,T18447N
 XFG.3.26	XFG.3_10615 > T20452C,A23598G
 XFG.3.27	XFG.3_10615 > G25793A
 XFG.3.27.1	XFG.3.27 > A4624G > A1588G > A5523G
 XFG.3.27.2	XFG.3.27 > A4624G > A1588G > C11339T,C12085T
 XFG.3.28	XFG.3_10615 > C24904T > C7764T,C28472T > G22113C
 XFG.3.29	XFG.3_10615 > T15330C,A23157G
 XFG.3.30	XFG.3_10615 > C10207T
 XFG.3.30.1	XFG.3.30 > G22218A
 XFG.3.30.2	XFG.3.30 > C5178A,C12641T,A23598C
 XFG.3.31	XFG.3 > A10317G > A22010G
 XFG.3.32	XFG.3_10615 > C1150T > C22127T
 XFG.3.33	XFG.3_10615 > C829T
 XFG.4	XFG > C20178T > C683T
 XFG.4.1	XFG.4 > C16457T
 XFG.4.1.1	XFG.4.1 > C23601A
 XFG.4.1.2	XFG.4.1 > C25350T
 XFG.4.1.3	XFG.4.1 > C2509T
 QY.1	XFG.4.1.3 > T27428A > G23610A
 QY.2	XFG.4.1.3 > C18981T
+QY.2.1	QY.2 > G28936T > G22865T
+QY.2.1.1	QY.2.1 > G23593C
+QY.2.2	QY.2 > A22525G > C16329T > C5184T > G20679N
+QY.2.2.1	QY.2.2 > C3176T > T2930C > C23601T
 QY.3	XFG.4.1.3 > C2334T
 XFG.4.1.4	XFG.4.1 > T25139C
 XFG.4.1.5	XFG.4.1 > C29580T > C21762T > T26304N
+XFG.4.1.6	XFG.4.1 > C26894T
+XFG.4.1.7	XFG.4.1 > A5177G
 XFG.4.2	XFG.4 > A25134G
 XFG.4.3	XFG.4 > T28474A
 XFG.4.4	XFG.4 > G8017T
 XFG.4.5	XFG.4 > G22218A > A2825G
 XFG.5	XFG > C20178T > C10039T
 XFG.5.1	XFG.5 > C8152T > C6543T
 XFG.5.1.1	XFG.5.1 > C23625T,T25502C > C11300N,A19365N,C22570N
 XFG.5.1.2	XFG.5.1 > C853T > G25244T
 XFG.5.1.3	XFG.5.1 > C23601T
 XFG.5.1.4	XFG.5.1 > C2485T
 XFG.5.1.5	XFG.5.1 > C24034T > C22883A
 XFG.5.1.6	XFG.5.1 > G23624A
 XFG.5.1.7	XFG.5.1 > A23598G,A28081G,C29311T
 XFG.5.2	XFG.5 > A9079G
 XFG.5.2.1	XFG.5.2 > C23601T
 XFG.5.2.2	XFG.5.2 > T26972C
 XFG.5.2.3	XFG.5.2 > C23758T
 XFG.5.2.4	XFG.5.2 > A9204G
 XFG.5.2.5	XFG.5.2 > C6500T,C27590T,T27785C,C28344T,A29638G > C10456N,C26753N
-RM.1	XFG.5.2.5 > A25076G
-RM.2	XFG.5.2.5 > C21762T
+RM.1	XFG.5.2.5 > C10456T,C26753T > A25076G
+RM.2	XFG.5.2.5 > C10456T,C26753T > C21762T
+RM.3	XFG.5.2.5 > C10456T,C26753T > C22000A,A22005C,T23485A > C6762N
 XFG.5.2.6	XFG.5.2 > C12295T > C23673T
+XFG.5.2.7	XFG.5.2 > G25677T > T22566C,G22688T > C4582N,C5183N,T14907N,C25669N,C29065N
 XFG.5.3	XFG.5 > C22323T > C7195N,C29272N
 XFG.5.4	XFG.5 > T2698C
 XFG.5.4.1	XFG.5.4 > G25855T
 QW.1	XFG.5.4.1 > G1463A > A23592G
 QW.1.1	QW.1 > C7834T > C22088T
+XFG.5.4.2	XFG.5.4 > C1420T,T16695C,G24199A,T27484C,A29617G
 XFG.6	XFG > C20178T > C22883A
 XFG.6.1	XFG.6 > C24034T > C23595T
 XFG.6.2	XFG.6 > C24034T >  T29409C
 XFG.6.2.1	XFG.6.2  > A22320G
+SC.1	XFG.6.2.1 > C10228T
 XFG.6.2.2	XFG.6.2 > A18585T
+SB.1	XFG.6.2.2 > T21414C
+SB.1.1	SB.1 > T1501A > G22865T
+XFG.6.2.3	XFG.6.2 > C9226T
 XFG.6.3	XFG.6 > C24034T > T8359C
 XFG.6.3.1	XFG.6.3 > C3743T > G26730A > A1194C > C920T
 XFG.6.3.2	XFG.6.3 > C3743T > G26730A > A1194C > A23598G > C1594N
 XFG.6.3.3	XFG.6.3 > C3743T > G26730A > A1194C > G28904T > G22899A > C1528N,C2226N,C14120N
 XFG.6.4	XFG.6 > C24034T > C8097T
 XFG.6.5	XFG.6 > C24034T > C23758T
 XFG.6.5.1	XFG.6.5 > C23601A > G3892N,C5178N,C25528N
 XFG.6.6	XFG.6 > C24034T > C5907T,C25282T,C25672T,A29621G > C25721T
 XFG.6.7	XFG.6 > C24034T > C17339T
 XFG.6.8	XFG.6 > C24034T > T6673C > C583T
 XFG.6.9	XFG.6 > C24034T > C27059T
 XFG.6.10	XFG.6 > C24034T > G28079T
 XFG.6.11	XFG.6 > C24034T > G18781A
 XFG.6.12	XFG.6 > C24034T > G2875A
+XFG.6.13	XFG.6 > C24034T > A23148C,T23158G
 XFG.7	XFG > C20178T > A28467T
 XFG.7.1	XFG.7 > A6351G,A9989G > A28268N
 XFG.7.1.1	XFG.7 > A6351G,A9989G > A28268C > A22010G,G28079T
 QZ.1	XFG.7.1.1 > C23625T
 XFG.7.1.2	XFG.7 > A6351G,A9989G > A28268C > A4822G > C19273T > G21830A,T22016C
 XFG.8	XFG > C20178T > C19170T > T17610C > A20163G
 XFG.8.1	XFG.8 > C15024T
 XFG.8.1.1	XFG.8.1 > G21724T,T22334C > A1124N
 XFG.8.2	XFG.8 > C5055T
 XFG.8.2.1	XFG.8.2 > C5796T > G24398A
 XFG.8.3	XFG.8 > C2857T
 XFG.8.4	XFG.8 > T18630C
 XFG.8.5	XFG.8 > C21306T
 XFG.9	XFG > C20178T > G7760A
 XFG.9.1	XFG.9 > A2500C,G24095T
 XFG.9.2	XFG.9 > G21586T
 XFG.9.3	XFG.9 > T12865C
 XFG.9.3.1	XFG.9.3 > G5968A > A23476T > A22023T
 XFG.9.3.2	XFG.9.3 > C6638T > T11551C
 XFG.9.4	XFG.9 > T7225G
 XFG.9.4.1	XFG.9.4 > G22241T,T25510C
 XFG.9.4.2	XFG.9.4 > C22127T
 XFG.9.5	XFG.9 > C22088T
 XFG.9.6	XFG.9 > C24337T > G24872T
 XFG.10	XFG > C20178T > T979A
 XFG.10.1	XFG.10 > C6629T
 XFG.10.2	XFG.10 > C5886T
 XFG.10.3	XFG.10 > C11416T
 XFG.10.4	XFG.10 > G22865T
+XFG.10.4.1	XFG.10.4 > C26013T > G22896C,C27752T > A12235N,A16824N
 XFG.10.5	XFG.10 > C11962T
 XFG.11	XFG > C20178T > C27494T
 XFG.12	XFG > C20178T > C17825T
 XFG.13	XFG > C20178T > A12788G > T3172C,C12534T,G19518T > C21762T
 XFG.14	XFG > C6539T,A23148C > G3259T,G25352T > T17007N
 XFG.14.1	XFG.14 > T17007C > G27754C > C23373T > C2485N,C19593N
 XFG.14.1.1	XFG.14.1 > C2485T,C19593T > C9598T,C12754T
 XFG.14.1.2	XFG.14.1 > C2485T,C19593T > G24386A
 RL.1	XFG.14.1.2 > G23587T > G15906N
 XFG.14.1.3	XFG.14.1 > C2485T,C19593T > C10798T
 XFG.14.1.4	XFG.14.1 > C2485T,C19593T > C19983T
 XFG.14.1.5	XFG.14.1 > C2485T,C19593T > C10183T > C817T
 XFG.14.1.6	XFG.14.1 > C2485T,C19593T > G23675T
 XFG.14.1.7	XFG.14.1 > C2485T,C19593T > C13432T > C22599T
 XFG.14.1.8	XFG.14.1 > C2485T,C19593T > C14216T
+XFG.14.1.9	XFG.14.1 > C2485T,C19593T > C23673T > C27944T
+XFG.14.1.10	XFG.14.1 > C2485T,C19593T > A6058G
 XFG.14.2	XFG.14 > T17007C > G27754C > A23592T
 XFG.14.2.1	XFG.14.2 > C11345T,C25047T,T25496C > C2485N,T18696N,C24157N
 XFG.14.3	XFG.14 > T17007C > C313T > C934T > A4584G,C16376T,A22001G > C15763N
 XFG.14.4	XFG.14 > T17007C > G27754C > C25680T,C28744T > C10908T
 XFG.14.5	XFG.14 > T17007C > G27754C > C5002T,T10819C,G27870T > C5365T,C9166T > T29062N
 XFG.14.6	XFG.14 > T17007C > G27754C > C5884T
 XFG.14.7	XFG.14 > T17007C > G27754C > C17463T
 XFG.14.8	XFG.14 > T17007C > G27754C > C9565T
 XFG.14.9	XFG.14 > T17007C > G27754C > G24770A
+XFG.14.10	XFG.14 > T17007C > G27754C > T23487G
 XFG.15	XFG > C20178T > G18040T,C20762T,  G23604A
 XFG.16	XFG > G4354A > G1784A
 XFG.17	XFG > A9970T
 XFG.17.1	XFG.17 > T21775A > T21738C > C5646N,C7086N
 XFG.17.2	XFG.17 > C3768T,C4202T,G4255A > A23598G > G3901N
 XFG.17.2.1	XFG.17 > C3768T,C4202T,G4255A > A23598G > G3901A > G22217A
 QQ.1	XFG.17.2.1 > G23593T,T29192C
 QQ.2	XFG.17.2.1 > T10771C > C11173T > A25439G > T1813N,C14178N
 QQ.3	XFG.17.2.1 > T10771C > C11173T > C4794T
 XFG.17.3	XFG.17 > G2731A > G22567T,C28528T
 XFG.17.4	XFG.17 > G22218A,A22595T > T1436N,C18888N,G29140N,G29414N
 XFG.18	XFG > C1960T,G24328T
 XFG.18.1	XFG.18 > G22567T > C11681N,C26058N
 XFG.19	XFG > C7113T,C14183T,C22419T > T6964N
 XFG.21	XFG > G20134T
@@ -4383,59 +4494,65 @@
 XFG.22.3	XFG.22 > C449T > C29118T
 XFG.23	XFG > C4901A
 XFG.23.1	XFG.23 > C1288T > G22567T > T606N
 XFG.23.1.1	XFG.23.1 > T606C > C29137T > C28473A,C29367T
 RB.1	XFG.23.1.1 > T22191G
 RB.2	XFG.23.1.1 > C16173T > C23673T
 XFG.23.1.2	XFG.23.1 > T606C > C5944T,C18912T,C21676T,C29546T > C21811N
 XFG.23.1.3	XFG.23.1 > T606C > C29137T > C25083T
 RV.1	XFG.23.1.3 > G22899A
 XFG.23.1.4	XFG.23.1 > T606C > C823A,C1780T,C8829T,C25658T,T27484C > T22334C
 XFG.23.1.5	XFG.23.1 > T606C > C3096T,C25613T > C15613N
 XFG.23.2	XFG.23 > C1288T >  T23948C  > C13548N,C23635N,G29179N
 XFG.24	XFG > C18928T > G21786T >  C6286N,C11124N,C22264N,C29635N
 XFG.25	XFG > C18928T > C20178T > C22347T
 XFG.26	XFG > C20178T > G27948T
+XFG.26.1	XFG.26 > C6354T
+XFG.26.2	XFG.26 > C817T,C24421T
+XFG.26.2.1	XFG.26.2 > G24434T
 XFG.28	XFG > C20178T > C18306T
 XFG.29	XFG > C20178T > A13444G
 XFG.30	XFG > C20178T > C5183T
 XFG.31	XFG > C20178T > G5017A
 XFG.32	XFG > A22320G > C11572T > C20956A >  T21941C  > G4255N,G29554N
 XFG.33	XFG > T5045C
 XFG.34	XFG > C20178T > T21965C
 XFG.35	XFG > C20178T > G28048T > C5581T,T10913C,T19158C
 XFG.36	XFG > C20178T > T10567C
 XFG.37	XFG > A29671N > C28475A > T5911C
 XFG.38	XFG > A29671N > C15615T > G1598A > C4893T
 XFG.39	XFG > C20178T > G29706N > C29614T > T27734C
 XFH	JN.1.16.1 > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G,        T28297C > C8818T                 > C21627A > C6310T > C3884T > C4993T > G4694A,C4891T,C9166T,T22566C,C23039G
 XFH.1	XFH > C29719A > A949G
 XFH.2	XFH > C16575T,G24697A
 XFJ	B.1.1 >           A23063T > T22882G,C22995A,        C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,        G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C >           G22599C > G22132T > C5239T,       G12892A,T16600C,T21653C,A22107G,                                         > C21627A > C22986T >  T22896C  > T22884G > C22792T,T22930A,A23933G,C25844T,G27414A,T28297C > T20799C
 XFJ.1	XFJ > G12769T
 XFJ.1.1	XFJ.1 > A15036G > C29200T > A12928G
 XFJ.1.2	XFJ.1 > A15036G > A22010G > C14913N,C25671N,C26110N
 XFJ.1.3	XFJ.1 > C2388T,A21875G,A22893G > T10717N
 XFJ.2	XFJ > G18903A
 XFJ.2.1	XFJ.2 >  A22995T
 XFJ.2.2	XFJ.2 > C29386T > C7768T
 XFJ.3	XFJ > G25352T
 XFJ.3.1	XFJ.3 > C4893T
 XFJ.3.1.1	XFJ.3.1 >  G23599T
 RA.1	XFJ.3.1.1  > C4021T > A22268T
 XFJ.3.1.2	XFJ.3.1 > G28727T,A28959C > C9559N,C11962N
+RW.1	XFJ.3.1.2 > C9559T,C11962T > C2878T > A22995C > C29281N
+RW.1.1	RW.1 > G22865T
 XFJ.3.1.3	XFJ.3.1 > C3587T > A6277N
+XFJ.3.1.4	XFJ.3.1 > A19890G
 XFJ.3.2	XFJ.3 > G14188A
 XFJ.4	XFJ > C18252T > A22012C,  A22995C
 XFJ.4.1	XFJ.4  > A27300T > T1501C
 XFJ.5	XFJ > C7044T,G22346T > A2356N
 XFJ.6	XFJ > C7006T
 XFJ.7	XFJ > T27212C
 XFJ.8	XFJ > C1919T > C20470A
 XFJ.8.1	XFJ.8 > A1565G,G25352T > C24310N,G28079N
 XFJ.9	XFJ > T2308C,T10273C
 XFJ.10	XFJ > C21682T
 XFK	XEC > C7113T > C12616T > A13121T > G15372T > C17502T,G21776A,G22203T,A25590G
 XFL	XEC >          T24376C >           C593T,C3505T,G24193T > C5534T,A5535T,G28378T
 XFM	B.1.1 >           A23063T > T22882G,C22995A,        C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,        G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C >           G22599C > G22132T > C5239T,       G12892A,T16600C,T21653C,A22107G,                                         > C21627A > C22986T >  T22896C  > T22884G > C7869T,C8818T,T22930A,A23933G,C25844T,G27414A > G4504A,T4579A,T15207C,C21928T,A26555C
 XFN	JN.1 > T23008N,T23010N >         G24872T >          T22928C > C23039G > G28884C > C25006T > C28291A >                 C21627A         > G2060A > C10228T > G22865T,A27321G > C9365T,T16600C,T21653C,A22107G,G22132T,G22599C,G29543T
 XFN.1	XFN > T28600C
@@ -4457,46 +4574,52 @@
 XFV.3	XFV > G19851A > G22899A
 XFV.4	XFV > G19851A > G29449A > C18329T
 XFV.5	XFV > C6539T
 XFV.6	XFV > G24947A
 XFW	B.1.1 >           A23063T > T22882G,                C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,T22896A,G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T23008N,T23010N >         G24872T >          T22928C > C23039G > G22599C > C22858T > C875A,A3908G,G12892A,T16600C,T22369C,G22865T, C22995C ,G26832T > C21627A,T21653C,A22012T,A22107G,G22132T
 XFW.1	XFW > C16457T, G23604A  > C9724N,G21901N
 XFW.1.1	XFW.1  > C9724T,G21901A > A23588C
 XFW.1.1.1	XFW.1.1 > A2818G > C27509T > A23592G
 XFY	B.1.1 >           A23063T > T22882G,C22995A,        C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,        G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T         > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G,        T28297C > C8818T,C22792T,A22893G > C21627A >           T4214C,T8350C, T22896G ,A23021G,C23039G,C23277T > C20178T > C10039T > C8152T > C6543T > T4714C > G23593C,C28432T,T29164C
 XFY.1	XFY > A18077G > C4456T,A25067G
 XFY.2	XFY > C8626T
 XFY.3	XFY > C29272T
 XFZ	B.1.1 >           A23063T > T22882G,C22995A,        C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,        G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T23008N,T23010N >         G24872T > C7113T > T22928C >           G22599C > C4999T >           G1954A >  T22896G  ,C23039G > G22132T > G12892A,T16600C,C21627A,T21653C,A22107G         > A23598G > G6647A > G6694A > G1148T,A22994G,C25006T,G25352T,G25552T,C26801T,C28291A,G28884C,C29272T
 XFZ.1	XFZ > A22486G > A22019G
 XFZ.2	XFZ > A28983G
+XFZ.2.1	XFZ.2 > A24999G > A2317N,A5097N,C17403N
+XFZ.3	XFZ > C19170T > T4330C > C2221T > A7864G > C5178T
 XGA	B.1.1 >           A23063T > T22882G,C22995A,        C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,        G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,       G12892A,T16600C,T21653C,A22107G,        T28297C >        C22792T,A22893G > C21627A >                          T22896G ,A23021G,C23039G,C23277T > T1501C,C19029T,C22883A,C24034T,G28913A
 XGA.1	XGA > C25578T
 XGA.2	XGA > C8140T
 XGA.3	XGA > C13647T,C21910T
+XGA.4	XGA > C5178T > G16197T > C18576N,C19152N,C23191N
 XGB	B.1.1 >           A23063T > T22882G,C22995A,        C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,        G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T >        C7869T,G12892A,T16600C,T21653C,A22107G,        T28297C > C8818T,C22792T,A22893G > C21627A > C29409T >        T8350C, T22896G ,A23021G,C23039G,C23277T > C13608T > C10615T > T28822G > C18885T > T15762C > T24289A > C8419T > C28737T > G1954A,T2074C,T3814C,C4999T
 XGC	B.1.1 >           A23063T > T22882G,C22995A,        C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,        G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C > T22928C > G22599C > G22132T > C5239T,C7869T,G12892A,T16600C,T21653C,A22107G,        T28297C > C8818T,C22792T,A22893G > C21627A >                          T22896G ,A23021G,C23039G,C23277T > C4586T,C9592T > G942A,T1477A,C20178T,T25514C
 XGD	B.1.1 >           A23063T > T22882G,                C23525T > C10029T,G22578A,C22674T,T22679C,C22686T,G22813T,G22992A,        A23055G,T23075C,T23599G,A27259C,C27807T > C10449A,A18163G,C23854A,G23948T,A24424T,T24469A,C25000T,C25584T,C26270T,C26577G,G26709A,A28271T,C28311T > T670G,C2790T,G4184A,C4321T,C9344T,A9424G,C9534T,       C10198T,G10447A,C12880T,C15714T,C17410T,C19955T,A20055G,C21618T,T22200G,A22688G,G22775A,A22786C,C26060T,C26858T,G27382C,A27383T,T27384C,A29510C > A23040A,A23013A > T22917G > C22295A > A22556G,A22629C > C897A,G3431T,A7842G,C8293T,G8393A,G11042T,C12789T,T13339C,T15756A,A18492G,C21622T,G21624C,C21711T,G21941T,T22032C,C22033A,A22034G,C22208T,C22353A,G22577C,G22770A,G22895C,        G22898A,A22910G,C22916T,T22942A,T23005A,G23012A,T23018C,T23019C,G23222A,C23271T,C23423T,C23604G,C24378T,C24990T,C25207T,G26529C,A26610G,C26681T,C26833T,C28958A > A6183G,C12815T > G21770N > T3565C,G11727A,C18894T,T22926C > T27810C >           G22599C > G22132T > C5239T,       G12892A,T16600C,T21653C,A22107G,                                         > C21627A > C22986T >  T22896C  > T22884G > C22792T,T22930A,A23933G,C25844T,G27414A,T28297C > T20799C >           C4893T > C3587T,A6277G > C13426T,T13890C,A22012C,  C22995C  ,C26058T
 XGE	XFG >        A23148C >        G25352T > T17007C > G27754C > C23373T > C19593T > C2065T,C6541T
 XGF	XFG >        A23148C >        G25352T > T17007C > G27754C > C23373T > C19593T > C10277T,A12490G,C13608T
 XGG	XFG >  C4214T , C8350T  > C4586T,C9592T > A10978T,T16224C,A16687G,G20134T
 XGH	XFG >  C8350T  > C9592T > C15660T > A10978T > C683T,C2334T,C2509T,T8350C,G15380T,C19029T
 miscBA1BA2Pre4321	B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > C4321T,C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G,C9866T > A22786C > A22688G > A29510C > C10198N > C22792N > A2832G > G22599N
 miscBA1BA2Post5386	B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G,C9866T > A22786C > A22688G > A29510C > C10198N > C22792N > A2832G > T5386G > G22599N
 miscBA1BA2Post8393	B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > C26858T > C9534T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9344T,A9424G,C9866T > A22786C > A22688G > A29510C > C10198N > C22792N > A2832G > T5386G > G8393A > G22599N
 XGJ	XFG > G22217A,A23598G > T979A,C4534T,C6990T,T15939C
 XGK	XFG > G22217A,A23598G > A5560G > C2065T,C5822T,C6541T,G7027T
 XGL	XFG > G22217A,A23598G > A5560G > C6629T,C6723T,C7051T,T18765A
 XGM	LP.8.1 >  T17334G  > C21627A > T21653C > T16600C > A23598G,G23856T > C4467T,C4893T,G7675T,C7869T,C8818T,C17436T,A20364G
 XGN	XFG.3.5.2 > C10369T > A6944G > C20104T,A24819G,G24872T,C25083T,G25401A,C25693T,C25925T,C27649T
 XGP	XFG >  C4214T  >  C8350T  >  T7869C  >  T8818C  >  T5239C  > G1954A,C4999T,C7113T >  A12892G , C16600T  > G27948T > C4893T,C6720T,C7735T,C9166A,A17460G,C18646T,C20178T,T27164C
 XGQ	XFG >  C4214T  >  C8350T  >  T7869C  >  T8818C  >  T5239C  > G1954A,C4999T,C7113T >  A12892G , C16600T  > G27948T > A9274G,T17268C, T29409C
 XGR	XFG >  C4214T  >  C8350T  >  T7869C  >  T8818C  >  T5239C  > G1954A,C4999T,C7113T >  A12892G , C16600T  > T2074C,G3403A,G3404A,T3814C,T5701G,G17334T,A18298G,C18885T,C25708T,C26822T,T28822G
 XGS	XFG >  C8350T  > C9592T > A10978T > C3096T,C21928T, T29409C
 XGT	JN.1 > T28297C > T22930A >  G18492A ,A19326G,T21738C > T16342C,T17859C, T18894C > G15451A,C15738T, A15756T ,T15939C > T15573C,C16323T,C21627A,G22112A > C15960T,G22865T,C23039G >  T11042G ,C11572T, T12789C , T12815C ,C12854T > C9866T,A10042G, A11727G ,C12473T,C12924T,G14290T > C7113T, G7842A , T8293C ,C8299T,A8390G, A8393G  > T4214C,C29409T > C3096T, C5239T ,T15366C,A22995C,T23600C,G25947A,C27812T,T28822G
+XGU	XFG.5.2 > C14318T > G2051A,C10778T,C11008T > T22792C,G22893A,A22994G,G23021A,T23277C,A23598G,G24872T,C25006T,G25352T,G25552T,C26801T,C28291A,C28297T,G28884C,C29272T, T29409C
+XGV	XFG >  C4214T  >  C8350T  >  T7869C  >  T8818C  >  T5239C  > G1954A,C4999T,C7113T > C1348T,T3814C,T4723C,C5144T,G9646A,C10525T,C10969T,C12400T,C13608T,C13824T,C23188T,C24319T
+XGW	XFG >  C4214T  >  C8350T  >  T7869C  >  T8818C  >  T5239C ,C20178T > G1954A,C4999T,C7113T > C3141A,C4893T,C10228T,T14418C,A22320G,C24034T,A25067G,G26109T, T29409C
 miscBA1BA2Pre10k	B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > C26858T > C12880T,C21618T > C17410T > G27382C,A27383T,T27384C > C9866N > A22786C > A22688G > A29510C > C10198T > C22792N > A2832G > T5386G > G8393A > G22599N
 miscBA1BA2Post13k	B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > C25000T > C22995A,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T,A27259C > G22578A,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > C15714T,C26060T > A20055G > C26858T > C21618T > C17410T > G27382C,A27383T,T27384C > A22786C > A22688G > A29510C > C10198N > C22792N > A2832G > T5386G > G8393A > A11537G > T13195C > G22599N
 miscBA2BA1PostSpike	B.1.1 > C10029T > C23854A,G23948T,C27807T > A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > G22578A,C22674T,T22679C,C22686T,A23040G,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T > G22992A,C22995A,A23013C,C25000T,A27259C > A18163G,T22882G,C26577G,G26709A > G22813T > T22200G > G22775A > C19955T > G10447A,C15714T,C26060T > A20055G > T670G,G4184A,C4321T > C9534T > C12880T,C21618T > C17410T > C9344T,A9424G > A22786C > A22688G > C2790T > C10198N > A26530N > C9866T
 miscDeltaBA1Post4k	B.1.1 > C21846T > C10029T > C15240T,C23854A,G23948T,C27807T > C21762T,C24130A,A28271T > C10449A,C23525T,T23599G,C23604A,C26270T,C28311T > G22578A,T22673C,C22674T,T22679C,C22686T,A23040G,A23055G,A23063T,T23075C,A24424T,T24469A,C25584T > G22992A,C22995A,A23013C,C25000T,A27259C > A18163G,T22882G,C26577G,G26709A > G22813T > G8393A,A11537G > T13195C > G22898A,A26530G > C23202A > C24503T > G23048A > G4181T > G210N > C21595N > G22599N
 miscDeltaBA1Post11k	B.1.1 > C21846T > C10029T > C15240T,C23854A,G23948T,C27807T > C21762T,C24130A,A28271T > T13195C,C23525T,T23599G,C23604A,C26270T,C28311T > C24503T,C25000T > C22995A,A23055G,A23063T,T23075C,C23202A,A24424T,T24469A,C25584T,A27259C > G22578A,T22673C,C22674T,T22679C,C22686T,A23040G > G22992A,A23013C > A18163G,T22882G,C26577G,G26709A > G22813T > A26530G > G23048A > G22898A > C21595N > G4181T > C6402T,C7124T > C8986T,G9053T > G210N > A11332G > A11201G > G22599N
 miscBA.5.2CJ.1	BM.1.1 > T23031C > C1627T > T23018C
 miscBA.5BA.2.75	BA.5 > A28330N > A27038N > C3796N,C3927T,C4586N,C5183T,C9866N,A12444N,G15451N