59e0ac66496c36893df2b1440a037557fed23ff4 max Mon Mar 23 04:31:33 2026 -0700 fixing up primateai makedoc, refs #37274 diff --git src/hg/makeDb/scripts/primateai/primateAi.as src/hg/makeDb/scripts/primateai/primateAi.as new file mode 100644 index 00000000000..3ed81a2dd70 --- /dev/null +++ src/hg/makeDb/scripts/primateai/primateAi.as @@ -0,0 +1,21 @@ +table primateAi +"PrimateAI-3D pathogenicity predictions for all possible missense variants" + ( + string chrom; "Chromosome" + uint chromStart; "Start position (0-based)" + uint chromEnd; "End position" + string name; "Amino acid change (e.g. V>M)" + uint score; "Percentile score (0-1000)" + char[1] strand; "Strand" + uint thickStart; "Thick start (same as chromStart)" + uint thickEnd; "Thick end (same as chromEnd)" + uint reserved; "Item RGB color" + string ref; "Reference allele" + string alt; "Alternate allele" + string gene; "Ensembl transcript ID" + string refSeq; "RefSeq transcript ID" + float scorePAI3D; "PrimateAI-3D raw score" + float percentile; "PrimateAI-3D percentile" + string prediction; "Prediction: benign or pathogenic" + string _mouseOver; "Mouse over text" + )