e89a2c6a10b38da2591e8e4e7132fe29a4b1fbd7
max
  Mon Apr 20 09:31:08 2026 -0700
varFreqs: add colorsDbSnv subtrack (hg38 and hs1)

CoLoRSdb v1.2.0 long-read SNV/indel population-frequency VCFs from 1,027
PacBio HiFi whole genomes, joint-called with DeepVariant and GLnexus.
The GRCh38 release is shown on hg38 and the CHM13 release on hs1 (both
are native, not lifted). This is the first varFreqs subtrack that
renders on hs1.

refs #36642

diff --git src/hg/makeDb/trackDb/human/varFreqs.ra src/hg/makeDb/trackDb/human/varFreqs.ra
index b2a2c5fe5da..da68ca0e747 100644
--- src/hg/makeDb/trackDb/human/varFreqs.ra
+++ src/hg/makeDb/trackDb/human/varFreqs.ra
@@ -460,15 +460,25 @@
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/hgdp1kFreq/hgdp1k.freq.vcf.gz
         visibility pack
         dataVersion v3.1.2
         priority 8
 
         track ga4kSnv
         shortLabel GA4K 552 PacBio LR
         longLabel Variant Frequencies: Genomic Answers for Kids (Children's Mercy) - 552 PacBio HiFi long-read WGS (pediatric rare-disease cohort)
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/ga4k/ga4kSnv.vcf.gz
         visibility pack
         priority 9
 
+        track colorsDbSnv
+        shortLabel CoLoRSdb 1,027 LR SNVs/indels
+        longLabel Variant Frequencies: CoLoRSdb v1.2.0 - 1,027 long-read PacBio HiFi WGS, DeepVariant+GLnexus joint-called SNVs and small indels
+        type vcfTabix
+        parent varFreqs on
+        bigDataUrl /gbdb/$D/varFreqs/colorsDb/colorsDbSnv.vcf.gz
+        visibility pack
+        dataVersion v1.2.0
+        priority 9.5
+