e8cfed22bdb02ca22850d6a33f82370df0d4b24f max Mon Apr 20 06:42:15 2026 -0700 adding related tracks from the long read sv supertrack diff --git src/hg/makeDb/trackDb/relatedTracks.ra src/hg/makeDb/trackDb/relatedTracks.ra index 89663724f28..0b200d4d079 100644 --- src/hg/makeDb/trackDb/relatedTracks.ra +++ src/hg/makeDb/trackDb/relatedTracks.ra @@ -75,15 +75,25 @@ hg19 pseudoYale60 refSeqComposite NCBI RefSeq Curated and RefSeq Other also contain some transcribed and untranscribed pseudogenes, respectively. hg19 constraintSuper gnomadPLI Predicted constraint metrics from gnomAD hg19 gnomadPLI constraintSuper Container track of various constraint scores # mm39: mm39 knownGene knownGeneArchive View previous versions of GENCODE Genes mm39 knownGeneArchive knownGene View the latest GENCODE Genes version # mm10 ENCODE4 Regulation: mm10 encode4Reg encode3Reg Previous ENCODE3 Regulation track mm10 encode3Reg encode4Reg New ENCODE4 Regulation track mm10 encode4Reg cCREs Related ENCODE4 cCRE annotations mm10 cCREs encode4Reg Related ENCODE4 regulation data + +# hg38 long-read SV supertrack cross-links to other SV resources: +hg38 lrSv gnomadStructuralVariants Short-read structural variants from gnomAD v4.1 +hg38 gnomadStructuralVariants lrSv Long-read structural variants across multiple cohorts +hg38 lrSv dbVarSv NCBI dbVar structural variants (short-read and long-read, germline and clinical) +hg38 dbVarSv lrSv Long-read structural variants across multiple cohorts +hg38 lrSv dgvPlus Database of Genomic Variants (DGV) structural variation catalog +hg38 dgvPlus lrSv Long-read structural variants across multiple cohorts +hg38 lrSv giabSv Genome in a Bottle high-confidence SV benchmark callsets +hg38 giabSv lrSv Long-read structural variants across multiple cohorts