089c09e98db52e92da694ab1a0c8891c1a7fd3e8 gperez2 Thu Apr 2 15:50:07 2026 -0700 Fix broken external links in trackDb HTML docs found by uiLinks cron (2026-03-23 run). Updated 261 trackDb HTML and .ra files: - Fixed 404s: replaced dead URLs (sequenceontology.org wiki, compgen.cshl.edu PDFs, chori.org, PolyPhen v1, uswest.ensembl.org, RIKEN GSC) with current locations; removed links for defunct sites (snpdata.cshl.edu, zfrhmaps, renlab encode3 download, oia.gachon.ac.kr, phylohmm.pdf across 92 conservation track docs). - Fixed 301s: updated http→https (encodeproject.org, flybase.org, gene-regulation.com, drive5.com/muscle, microbesonline.org/fasttree, brain-map.org); updated moved domains (blackwell-synergy→wiley, genome.cshlp.org path fix, sanger.ac.uk path fix); removed hijacked domains (seqll.com, orfeomecollaboration.org, farnhamlab.com). - Fixed 302s: updated http→https (ensembl.org, affymetrix.com, asntech.org, cdna.eva.mpg.de, arcseqhub.com); updated moved domains (dfam.janelia.org→dfam.org, hmmer.janelia.org→hmmer.org, immuneepitope.org→iedb.org, ensembl variation path). No RM. diff --git src/hg/makeDb/trackDb/mouse/igtc.html src/hg/makeDb/trackDb/mouse/igtc.html index 78b179d92e0..0b674709167 100644 --- src/hg/makeDb/trackDb/mouse/igtc.html +++ src/hg/makeDb/trackDb/mouse/igtc.html @@ -13,31 +13,31 @@ for Modeling Human Disease</A> (Toronto, Canada)</TD></TR> <TR><TD><B><FONT COLOR="#6699FF">EGTC</FONT></B>:</TD> <TD><A HREF="https://egtc.jp/action/main/index" TARGET=_BLANK>Exchangeable Gene Trap Clones</A> (Kumamoto University, Japan)</TD></TR> <TR><TD><B><FONT COLOR="#00CC00">ESDB</FONT></B>:</TD> <TD>Embryonic Stem Cell Database (University of Manitoba, Canada)</TD></TR> <TR><TD><B><FONT COLOR="#CC9900">FHCRC</FONT></B>:</TD> <TD><A HREF="https://labs.icahn.mssm.edu/sorianolab/gene-trap/gene-trap-mutagenesis/" TARGET=_BLANK>Soriano Lab Gene Trap Database</A> (originally at Fred Hutchinson Cancer Research Center, Seattle, USA; now at Mount Sinai School of Medicine, Manhattan, NY)</TD></TR> <TR><TD><B><FONT COLOR="#FF9900">GGTC</FONT></B>:</TD> <TD><A HREF="http://www.genetrap.de" TARGET=_BLANK>German Gene Trap Consortium</A> (Germany)</TD></TR> <TR><TD><B><FONT COLOR="#996600">SIGTR</FONT></B>:</TD> - <TD><A HREF="https://www.sanger.ac.uk/science/collaboration/sanger-institute-gene-trap-resource" + <TD><A HREF="https://www.sanger.ac.uk/collaboration/sanger-institute-gene-trap-resource/" TARGET=_BLANK>Sanger Institute Gene Trap Resource</A> (Cambridge, UK)</TD></TR> <TR><TD><B><FONT COLOR="#CC0000">TIGEM</FONT></B>:</TD> <TD><A HREF="https://www.tigem.it/" TARGET=_BLANK>TIGEM-IRBM Gene Trap</A> (Naples, Italy)</TD></TR> <TR><TD><B><FONT COLOR="#AA0066">TIGM</FONT></B>:</TD> <TD><A HREF="https://www.tigm.org/" TARGET=_BLANK>Texas Institute for Genomic Medicine</A> (Houston, Texas)</TD></TR> </TABLE> </P> <H2>Methods</H2> <P> The <A HREF="https://igtc.org/info/pipeline.html" TARGET=_BLANK>IGTC