ed005215c7fdd3e97c61edb41931c89805d9566b max Thu Apr 9 03:06:48 2026 -0700 Add repeatId field to webstr bigBed for outlinks, update webstr and strVar docs, refs #36652 Co-Authored-By: Claude Opus 4.6 (1M context) diff --git src/hg/makeDb/scripts/webstr/webstr.as src/hg/makeDb/scripts/webstr/webstr.as index 42cc933629e..15a55aa3aec 100644 --- src/hg/makeDb/scripts/webstr/webstr.as +++ src/hg/makeDb/scripts/webstr/webstr.as @@ -1,26 +1,27 @@ table webstr "WebSTR short tandem repeat loci with allele frequency data from EnsembleTR panel" ( string chrom; "Chromosome" uint chromStart; "Start position" uint chromEnd; "End position" string name; "Repeat motif x copy count" uint score; "Score (0-1000)" char[1] strand; "Strand" uint thickStart; "Thick start (same as chromStart)" uint thickEnd; "Thick end (same as chromEnd)" uint reserved; "Item color RGB" string motif; "Repeat unit motif" uint period; "Length of repeat unit" uint numCopies; "Number of repeat copies in reference" + string repeatId; "WebSTR repeat identifier" lstring afrHist; "AFR allele frequency histogram (space-separated allele=freq pairs)" uint afrN; "AFR sample count" lstring amrHist; "AMR allele frequency histogram (space-separated allele=freq pairs)" uint amrN; "AMR sample count" lstring easHist; "EAS allele frequency histogram (space-separated allele=freq pairs)" uint easN; "EAS sample count" lstring eurHist; "EUR allele frequency histogram (space-separated allele=freq pairs)" uint eurN; "EUR sample count" lstring sasHist; "SAS allele frequency histogram (space-separated allele=freq pairs)" uint sasN; "SAS sample count" )