b6aee4c6471cddebd638fec8dbb988c29a69bc22 markd Thu Apr 23 21:58:41 2026 -0700 import of GENCODE V50, MV39, and V50lift37; added a command to do import with a single command diff --git src/hg/makeDb/doc/hg19.gencode.txt src/hg/makeDb/doc/hg19.gencode.txt index db76dbfa2e1..9a316cd058c 100644 --- src/hg/makeDb/doc/hg19.gencode.txt +++ src/hg/makeDb/doc/hg19.gencode.txt @@ -1449,15 +1449,21 @@ # edit all.joiner to add ~/tmp/gencodeV${ver}.joiner # if final release, Update 'Release Notes' # human/hg19/wgEncodeGencodeSuper.html jkmake DBS=hg19 # check joiner pushd /hive/data/genomes/hg19/bed/gencodeV${ver}/hgcImport${pre} make -f ~/kent/src/hg/makeDb/outside/gencode/gencodeLoad.mk joinerCheck # check tracks in browser sandbox # commit all jkmake DBS=hg19 alpha ######################################################################### +2026-04-23: import of GENCODE V50 pre-release for GENCODE Versions (markd) +Ensembl release 116 scheduled for mid-May. + +cd ~/kent/src/hg/makeDb/outside/gencode +i./bin/gencodeBuildRelease hg19 50lift37 pre "May 2026" 116 >& hg19.log& +#########################################################################