24891487d4c04f503b44631ea97773e8a2071b56
hiram
  Fri May 1 12:39:24 2026 -0700
explicit path names to allow these scripts to work on cron jobs refs #31811

diff --git src/hg/utils/automation/asmHubTrackDb.sh src/hg/utils/automation/asmHubTrackDb.sh
index 881e49b7323..0377c7c16d8 100755
--- src/hg/utils/automation/asmHubTrackDb.sh
+++ src/hg/utils/automation/asmHubTrackDb.sh
@@ -886,31 +886,31 @@
 type bigGenePred
 bigDataUrl bbi/%s.xenoRefGene.bb
 url https://www.ncbi.nlm.nih.gov/nuccore/\$\$
 urlLabel NCBI Nucleotide database:
 labelFields name,geneName,geneName2
 defaultLabelFields geneName
 searchIndex name
 searchTrix ixIxx/%s.xenoRefGene.ix
 html html/%s.xenoRefGene\n\n" "${asmId}" "${asmId}" "${asmId}"
 $scriptDir/asmHubXenoRefGene.pl $asmId $buildDir/html/$asmId.names.tab $buildDir/trackData > $buildDir/html/$asmId.xenoRefGene.html
 fi
 
 ###################################################################
 # Ensembl genes
 if [ -s ${buildDir}/trackData/ensGene/bbi/${asmId}.ensGene.bb ]; then
-export oldStyle=`bigBedInfo ${buildDir}/trackData/ensGene/bbi/${asmId}.ensGene.bb | grep -c "fieldCount: 12"`
+export oldStyle=`/cluster/bin/x86_64/bigBedInfo ${buildDir}/trackData/ensGene/bbi/${asmId}.ensGene.bb | grep -c "fieldCount: 12"`
 rm -f ${buildDir}/bbi/${asmId}.ensGene.bb
 ln -s ../trackData/ensGene/bbi/${asmId}.ensGene.bb ${buildDir}/bbi/${asmId}.ensGene.bb
 rm -f ${buildDir}/ixIxx/${asmId}.ensGene.ix
 rm -f ${buildDir}/ixIxx/${asmId}.ensGene.ixx
 rm -f ${buildDir}/genes/${asmId}.ensGene.*.gtf.gz
 export gtfGz=`ls ${buildDir}/trackData/ensGene/${asmId}.ensGene.*.gtf.gz`
 if [ -s "${gtfGz}" ]; then
     mkdir -p ${buildDir}/genes
     bName=`basename "${gtfGz}"`
    ln -s ../trackData/ensGene/${bName} ${buildDir}/genes/${bName}
 fi
 
 ### if we had more than one index, but no, we are using ixIxx files
 # export indexList=`bigBedInfo -extraIndex ${buildDir}/bbi/${asmId}.ensGene.bb | grep -w field | grep -w with | awk '{print $1}' | xargs echo | tr ' ' ','`