46f88622e6ec2bbc09f403eeb9ec6122eb05931f
lrnassar
  Thu Apr 30 15:41:01 2026 -0700
Releasing PrimateAI-3D and PromoterAI tracks to beta and RR. refs #37274 refs #37278

Drops the alpha tag from both tracks under predictionScoresSuper. Adds
'New' pennantIcons on primateAi and promoterAi pointing at the May 1, 2026
newsarch anchor, and an 'Updated' pennantIcon on the predictionScoresSuper
supertrack. Adds a combined release post to newsarch.html with an HBB
hg38 screenshot illustrating PrimateAI-3D coding-region calls alongside
PromoterAI per-allele scores in the proximal promoter, and updates the
indexNews.html sidebar.

diff --git src/hg/makeDb/trackDb/human/primateAi.ra src/hg/makeDb/trackDb/human/primateAi.ra
index 1e266944af2..9b27f6b8169 100644
--- src/hg/makeDb/trackDb/human/primateAi.ra
+++ src/hg/makeDb/trackDb/human/primateAi.ra
@@ -1,26 +1,27 @@
 track primateAi
 shortLabel PrimateAI-3D
 longLabel PrimateAI-3D Pathogenicity Predictions for Missense Variants
 type bigBed 9 +
 parent predictionScoresSuper
+pennantIcon New red ../goldenPath/newsarch.html#050126 "Released May 1, 2026"
 bigDataUrl /gbdb/$D/_primateAi/primateAi.bb
 itemRgb on
 visibility dense
 tableBrowser off
 scoreFilter 0
 scoreFilterLimits 0:1000
 mouseOverField _mouseOver
 filterValues.prediction benign|Benign,pathogenic|Pathogenic
 filterLabel.prediction Prediction
 filter.percentile 0
 filterLimits.percentile 0:1
 filterByRange.percentile on
 filterLabel.percentile Percentile score
 filter.scorePAI3D 0
 filterLimits.scorePAI3D 0:1
 filterByRange.scorePAI3D on
 filterLabel.scorePAI3D PrimateAI-3D raw score (clinical threshold 0.821)
 labelFields name,aaChange
 defaultLabelFields name
 maxWindowToDraw 2000000
 urls gene="https://www.ensembl.org/Homo_sapiens/Transcript/Summary?t=$$" refSeq="https://www.ncbi.nlm.nih.gov/nuccore/$$"