46f88622e6ec2bbc09f403eeb9ec6122eb05931f
lrnassar
  Thu Apr 30 15:41:01 2026 -0700
Releasing PrimateAI-3D and PromoterAI tracks to beta and RR. refs #37274 refs #37278

Drops the alpha tag from both tracks under predictionScoresSuper. Adds
'New' pennantIcons on primateAi and promoterAi pointing at the May 1, 2026
newsarch anchor, and an 'Updated' pennantIcon on the predictionScoresSuper
supertrack. Adds a combined release post to newsarch.html with an HBB
hg38 screenshot illustrating PrimateAI-3D coding-region calls alongside
PromoterAI per-allele scores in the proximal promoter, and updates the
indexNews.html sidebar.

diff --git src/hg/makeDb/trackDb/human/promoterAi.ra src/hg/makeDb/trackDb/human/promoterAi.ra
index 216e1515711..09f8e65c955 100644
--- src/hg/makeDb/trackDb/human/promoterAi.ra
+++ src/hg/makeDb/trackDb/human/promoterAi.ra
@@ -1,99 +1,100 @@
 track promoterAi
 shortLabel PromoterAI
 longLabel PromoterAI Promoter Variant Impact Scores (zoom for exact score)
 type bigWig
 parent predictionScoresSuper
 compositeTrack on
 tableBrowser off
 visibility hide
+pennantIcon New red ../goldenPath/newsarch.html#050126 "Released May 1, 2026"
 
         track promoterAiA
         shortLabel Mutation: A
         longLabel PromoterAI: Mutation is A
         type bigWig
         parent promoterAi on
         visibility dense
         bigDataUrl /gbdb/$D/_promoterAi/a.bw
         maxHeightPixels 128:40:8
         viewLimits -1:1
         viewLimitsMax -1:1
         maxWindowToDraw 10000000
         maxWindowToQuery 500000
         mouseOverFunction noAverage
         alwaysZero on
         autoScale off
         color 200,0,0
         altColor 0,0,200
 
         track promoterAiC
         shortLabel Mutation: C
         longLabel PromoterAI: Mutation is C
         type bigWig
         parent promoterAi on
         visibility dense
         bigDataUrl /gbdb/$D/_promoterAi/c.bw
         maxHeightPixels 128:40:8
         viewLimits -1:1
         viewLimitsMax -1:1
         maxWindowToDraw 10000000
         maxWindowToQuery 500000
         mouseOverFunction noAverage
         alwaysZero on
         autoScale off
         color 200,0,0
         altColor 0,0,200
 
         track promoterAiG
         shortLabel Mutation: G
         longLabel PromoterAI: Mutation is G
         type bigWig
         parent promoterAi on
         visibility dense
         bigDataUrl /gbdb/$D/_promoterAi/g.bw
         maxHeightPixels 128:40:8
         viewLimits -1:1
         viewLimitsMax -1:1
         maxWindowToDraw 10000000
         maxWindowToQuery 500000
         mouseOverFunction noAverage
         alwaysZero on
         autoScale off
         color 200,0,0
         altColor 0,0,200
 
         track promoterAiT
         shortLabel Mutation: T
         longLabel PromoterAI: Mutation is T
         type bigWig
         parent promoterAi on
         visibility dense
         bigDataUrl /gbdb/$D/_promoterAi/t.bw
         maxHeightPixels 128:40:8
         viewLimits -1:1
         viewLimitsMax -1:1
         maxWindowToDraw 10000000
         maxWindowToQuery 500000
         mouseOverFunction noAverage
         alwaysZero on
         autoScale off
         color 200,0,0
         altColor 0,0,200
 
         track promoterAiOverlaps
         shortLabel PromoterAI overlaps
         longLabel PromoterAI: Positions with >1 score due to overlapping transcripts
         type bigBed 9 +
         parent promoterAi on
         visibility dense
         bigDataUrl /gbdb/$D/_promoterAi/overlaps.bb
         mouseOverField _mouseOver
         itemRgb on
         maxWindowToDraw 10000000
         maxItems 50000
         filterByRange.scoreDiff on
         filter.scoreDiff 0.01
         filterLimits.scoreDiff 0:2
         filterLabel.scoreDiff Minimum score difference across transcripts
         scoreFilter 0
         scoreFilterLimits 0:1000
         scoreLabel Absolute PromoterAI score * 1000