375022845a4226d17c2717cc844f4e3ef5eb5b5e
hiram
  Tue May 26 20:13:31 2026 -0700
resetting the bigDataUrl to hgdownload addresses refs #31811

diff --git src/hg/makeDb/doc/vgp577way/vgp577way.pl src/hg/makeDb/doc/vgp577way/vgp577way.pl
index 6961e84ed0a..bd9e94d85ac 100755
--- src/hg/makeDb/doc/vgp577way/vgp577way.pl
+++ src/hg/makeDb/doc/vgp577way/vgp577way.pl
@@ -142,32 +142,32 @@
 printf "    viewUi on\n";
 printf "    subTrack cons577way\n";
 printf "\n";
 
 # the bigMaf track
 printf "        track vgp577way\n";
 printf "        subTrack cons577wayViewalign\n";
 printf "        shortLabel VGP %d-way\n", $totalSpecies;
 printf "        longLabel VGP Cactus alignment on %d species\n", $totalSpecies;
 printf "        subGroups view=align\n";
 printf "        noInherit on\n";
 printf "        type bigMaf\n";
 printf "        viewUi on\n";
 printf "        itemFirstCharCase noChange\n";
 printf "        group compGeno\n";
-printf "        bigDataUrl contrib/vgp577way/%s.vgp577way.bb\n", $refAcc;
-printf "        summary contrib/vgp577way/%s.vgp577waySummary.bb\n", $refAcc;
+printf "        bigDataUrl https://hgdownload.soe.ucsc.edu/hubs/VGP/vgp577way/bbi/%s/%s.vgp577way.bb\n", $refAcc, $refAcc;
+printf "        summary https://hgdownload.soe.ucsc.edu/hubs/VGP/vgp577way/bbi/%s/%s.vgp577waySummary.bb\n", $refAcc, $refAcc;
 printf "        irows on\n";
 printf "        color 0, 10, 100\n";
 printf "        altColor 0,90,10\n";
 
 # speciesCodonDefault
 printf "        speciesCodonDefault %s\n", $refAcc;
 
 # speciesGroups - list of clade identifiers
 printf "        speciesGroups";
 foreach my $cl (@cladeOrder) {
   printf " %s", cladeToId($cl);
 }
 printf "\n";
 
 # sGroup_ lines - accessions in order.list order within each clade
@@ -182,57 +182,58 @@
 # speciesLabels - map accession to common name
 printf "        speciesLabels";
 foreach my $acc (@orderAcc) {
   my $key = tsvKey($acc);
   printf " %s=\"%s\"", $acc, $comName{$key};
 }
 printf "\n";
 
 # speciesDefaultOff - all species from order.list
 printf "        speciesDefaultOff";
 foreach my $acc (@orderAcc) {
   printf " %s", $acc;
 }
 printf "\n";
 
-if ( -s "../../contrib/vgp577way/${refAcc}.vgp577wayPhyloP.bw" ) {
+my $bwFile = "/hive/data/genomes/asmHubs/VGP/vgp577way/bbi/${refAcc}/${refAcc}.vgp577wayPhyloP.bw";
+if ( -s "${bwFile}" ) {
 
-my $bwInfo = `bigWigInfo ../../contrib/vgp577way/${refAcc}.vgp577wayPhyloP.bw | egrep "min:|max:" | awk '{printf "%.2f\\n", \$NF}'| xargs echo | tr ' ' ':'`;
+my $bwInfo = `bigWigInfo ${bwFile} | egrep "min:|max:" | awk '{printf "%.2f\\n", \$NF}'| xargs echo | tr ' ' ':'`;
 chomp $bwInfo;
 my ($bwMin, $bwMax) = split(':', $bwInfo);
 my $viewLimitMin = $bwMin / 2.0;
 my $viewLimitMax = $bwMax / 2.0;
 my $bigWigInfo = $bwInfo;
 $bigWigInfo =~ s/:/ /;
 
 printf "
     # PhyloP conservation
     track cons577wayViewphyloP
     shortLabel Basewise Conservation (phyloP)
     view phyloP
     visibility full
     subTrack cons577way
     viewLimits %.1f:%.1f
 ", $viewLimitMin, $viewLimitMax;
 
 printf "
         track phyloP577wayREV
         subTrack cons577wayViewphyloP
         subGroups view=phyloP
         shortLabel 577 phyloP
         longLabel VGP %d species Basewise Conservation by PhyloP phyloFit
         configurable on
         noInherit on
         type bigWig %s
-        bigDataUrl contrib/vgp577way/%s.vgp577wayPhyloP.bw
+        bigDataUrl https://hgdownload.soe.ucsc.edu/hubs/VGP/vgp577way/bbi/%s/%s.vgp577wayPhyloP.bw
         maxHeightPixels 100:50:11
         viewLimits %.1f:%.1f
         autoScale off
         spanList 1
         windowingFunction mean
         color 60,60,140
         altColor 140,60,60
         priority 1
         logo on
-", $totalSpecies, $bigWigInfo, $refAcc, $viewLimitMin, $viewLimitMax;
+", $totalSpecies, $bigWigInfo, $refAcc, $refAcc, $viewLimitMin, $viewLimitMax;
 
 }