19c16827a214d3384ae7e6052355dbbc8bc7de46
jbirgmei
  Fri May 29 00:42:09 2026 -0700
Varaico release 3 (20260527): bump dataVersion to release 3, update makeDoc. refs #37658

diff --git src/hg/makeDb/trackDb/human/trackDb.ra src/hg/makeDb/trackDb/human/trackDb.ra
index 00cd7a137ee..65c13cd63d9 100644
--- src/hg/makeDb/trackDb/human/trackDb.ra
+++ src/hg/makeDb/trackDb/human/trackDb.ra
@@ -230,51 +230,84 @@
         itemRgb on
         parent varsInPubs pack
         urls pubmedIds="https://www.ncbi.nlm.nih.gov/pubmed/$$"
         mouseOver $name found in ${numPubmedIds} PubMed articles
         html varsInPubs
 
         track varaico
         shortLabel Varaico Variants
         longLabel Varaico Variants extracted from full text publications, titles, and abstracts
         visibility dense
         type bigBed 9 +
         bigDataUrl /gbdb/$D/bbi/varaico.bb
         noScoreFilter on
         exonNumbers off
         # itemRgb on
-        dataVersion release 2 (20251110)
+        dataVersion release 3 (20260527)
         parent varsInPubs pack
         urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" rgene="https://www.ncbi.nlm.nih.gov/nuccore/$$"
         mouseOver <b>$hgncSymbol $variantOrigStrs</b> in: $author ($journal, $year) - $title <br> <b>Number of publications:</b> $articlesCount <br> <b>Variant Effect:</b> $variantEffect
         html varaico.html
 
         track varaicoSuppl
         shortLabel Varaico Variants (suppl)
         longLabel Varaico Variants extracted from Supplementary Data
         visibility dense
         type bigBed 9 +
         bigDataUrl /gbdb/$D/bbi/varaicoSuppl.bb
         noScoreFilter on
         exonNumbers off
         # itemRgb on
-        dataVersion release 2 (20251110)
+        dataVersion release 3 (20260527)
         parent varsInPubs pack
         urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" rgene="https://www.ncbi.nlm.nih.gov/nuccore/$$"
         mouseOver <b>$hgncSymbol $variantOrigStrs</b> in: $author ($journal, $year) - $title <br> <b>Number of publications:</b> $articlesCount <br> <b>Variant Effect:</b> $variantEffect
         html varaico.html
 
+        track varaicoTest
+        shortLabel Varaico Variants Test
+        longLabel Varaico Variants Test extracted from full text publications, titles, and abstracts
+        visibility pack
+        type bigBed 9 +
+        bigDataUrl /hive/users/jbirgmei/TRACK_VERSIONS/v5_20260527/$D/normalized_variants.$D.bb
+        noScoreFilter on
+        exonNumbers off
+        # itemRgb on
+        dataVersion release 3 (20260527)
+        parent varsInPubs pack
+        urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" rgene="https://www.ncbi.nlm.nih.gov/nuccore/$$"
+        mouseOver <b>$hgncSymbol $variantOrigStrs</b> in: $author ($journal, $year) - $title <br> <b>Number of publications:</b> $articlesCount <br> <b>Variant Effect:</b> $variantEffect
+        html varaico.html
+        release alpha
+
+        track varaicoSupplTest
+        shortLabel Varaico Variants Test (suppl)
+        longLabel Varaico Variants Test extracted from Supplementary Data
+        visibility pack
+        type bigBed 9 +
+        bigDataUrl /hive/users/jbirgmei/TRACK_VERSIONS/v5_20260527/$D/normalized_variants_supplements.$D.bb
+        noScoreFilter on
+        exonNumbers off
+        # itemRgb on
+        dataVersion release 3 (20260527)
+        parent varsInPubs pack
+        urls outlink="$$" selectedPmid="https://www.ncbi.nlm.nih.gov/pubmed/$$" rgene="https://www.ncbi.nlm.nih.gov/nuccore/$$"
+        mouseOver <b>$hgncSymbol $variantOrigStrs</b> in: $author ($journal, $year) - $title <br> <b>Number of publications:</b> $articlesCount <br> <b>Variant Effect:</b> $variantEffect
+        html varaico.html
+        release alpha
+
+
 track caseControl
 compositeTrack on
 shortLabel Case Control
 longLabel Case Control Consortium
 group phenDis
 visibility hide
 type chromGraph
 minMax 0,15
 linesAt 5,10
 
     track cccTrendPvalBd
     parent caseControl
     shortLabel CCC Bipolar Dis
     longLabel Case Control Consortium Bipolar Disorder Trend -log10 P-value
     priority 1