5603b712f9fe5889953fee5061af23f55fe5e6d1 max Fri May 22 07:16:06 2026 -0700 Prefixing all subtrack longLabels in the Human Methylation Atlas summary and signals tracks with "Methylation Atlas: " so the source of each subtrack is clear in the track list, refs #36826 Co-Authored-By: Claude Sonnet 4.6 diff --git src/hg/makeDb/trackDb/human/methylationAtlas.ra src/hg/makeDb/trackDb/human/methylationAtlas.ra index 9e12df28a58..4387ab1ade5 100755 --- src/hg/makeDb/trackDb/human/methylationAtlas.ra +++ src/hg/makeDb/trackDb/human/methylationAtlas.ra @@ -3,45 +3,45 @@ parent dnaMethylation shortLabel Human Methylation Atlas Summary longLabel Human Methylation Atlas summary regions and enhancers visibility pack compositeTrack on type bigBed 4 . dataVersion Data release version 2 showCfg on html methylationAtlas.html track hmaSummaryUnmethylated priority 1 type bigBed 9 . itemRgb on shortLabel All Unmeth Regions - longLabel All unmethylated regions + longLabel Methylation Atlas: All unmethylated regions parent humanMethylationAtlasSummary on bigDataUrl /gbdb/$D/dnaMethylationAtlas/hmaSummaryUnmethylated.bb visibility dense filterLabel.name Cell/Tissue Type filterValues.name Adipocytes,Bladder-Ep,Blood-B,Blood-Granul,Blood-Mono+Macro,Blood-NK,Blood-T,Bone-Osteob,Breast-Basal-Ep,Breast-Luminal-Ep,Colon-Ep,Colon-Fibro,Dermal-Fibro,Endothel,Epid-Kerat,Eryth-prog,Fallopian-Ep,Gallbladder,Gastric-Ep,Head-Neck-Ep,Heart-Cardio,Heart-Fibro,Kidney-Ep,Liver-Hep,Lung-Ep-Alveo,Lung-Ep-Bron,Neuron,Oligodend,Ovary-Ep,Pancreas-Acinar,Pancreas-Alpha,Pancreas-Beta,Pancreas-Delta,Pancreas-Duct,Prostate-Ep,Skeletal-Musc,Small-Int-Ep,Smooth-Musc,Thyroid-Ep track hmaSummaryPutEnhancers priority 2 type bigBed 9 . itemRgb on shortLabel Putative Enhancers - longLabel Putative enhancers from unmethylated regions + longLabel Methylation Atlas: Putative enhancers from unmethylated regions parent humanMethylationAtlasSummary on bigDataUrl /gbdb/$D/dnaMethylationAtlas/hmaSummaryPutEnhancers.bb visibility dense filterLabel.name Cell/Tissue Type filterValues.name Bladder-Ep,Blood-B,Blood-Granul,Blood-Mono+Macro,Blood-NK,Blood-T,Breast-Basal-Ep,Breast-Luminal-Ep,Colon-Ep,Colon-Fibro,Dermal-Fibro,Endothel,Epid-Kerat,Gastric-Ep,Head-Neck-Ep,Heart-Cardio,Heart-Fibro,Kidney-Ep,Liver-Hep,Lung-Ep-Alveo,Lung-Ep-Bron,Neuron,Oligodend,Pancreas-Acinar,Pancreas-Alpha,Pancreas-Beta,Pancreas-Delta,Pancreas-Duct,Prostate-Ep,Skeletal-Musc,Small-Int-Ep,Thyroid-Ep track hmaSummaryU250 priority 3 type bigBed 9 . itemRgb on shortLabel Top 250 UMRs/Cell - longLabel Top 250 unmethylated regions specific to each cell type + longLabel Methylation Atlas: Top 250 unmethylated regions specific to each cell type parent humanMethylationAtlasSummary on bigDataUrl /gbdb/$D/dnaMethylationAtlas/hmaSummaryU250.bb visibility dense filterLabel.name Cell/Tissue Type filterValues.name Adipocytes,Bladder-Ep,Blood-B,Blood-Granul,Blood-Mono+Macro,Blood-NK,Blood-T,Bone-Osteob,Breast-Basal-Ep,Breast-Basal-Ep:Breast-Luminal-Ep,Breast-Luminal-Ep,Colon-Ep,Colon-Ep:Gastric-Ep:Small-Int-Ep,Colon-Ep:Small-Int-Ep,Colon-Fibro,Colon-Fibro:Heart-Fibro,Dermal-Fibro,Endothel,Epid-Kerat,Eryth-prog,Fallopian-Ep,Fallopian-Ep:Ovary-Ep,Gallbladder,Gastric-Ep,Gastric-Ep:Small-Int-Ep,Head-Neck-Ep,Heart-Cardio,Heart-Cardio:Heart-Fibro,Heart-Cardio:Skeletal-Musc:Smooth-Musc,Heart-Fibro,Kidney-Ep,Liver-Hep,Lung-Ep-Alveo,Lung-Ep-Alveo:Lung-Ep-Bron,Lung-Ep-Bron,Neuron,Neuron:Oligodend,Oligodend,Ovary-Ep,Pancreas-Acinar,Pancreas-Alpha,Pancreas-Alpha:Pancreas-Beta:Pancreas-Delta,Pancreas-Beta,Pancreas-Delta,Pancreas-Duct,Prostate-Ep,Skeletal-Musc,Skeletal-Musc:Smooth-Musc,Small-Int-Ep,Smooth-Musc,Thyroid-Ep