fabf13fff3e3abaf7ef83c69a8c60d0142c288a1 braney Fri May 15 12:05:59 2026 -0700 fix two remaining quickLift issues on UCSC RefSeq item detail page: CCDS link routes to source assembly (with coords lifted back) so the ccdsGene handler doesn't try to open the hub-virtual db, and Get Genomic Sequence Near Gene now reads sequence from the destination assembly at the lifted exon coordinates refs #36125 diff --git src/hg/hgc/ccdsClick.h src/hg/hgc/ccdsClick.h index 2d0b9251b7a..cd6b73d6a8b 100644 --- src/hg/hgc/ccdsClick.h +++ src/hg/hgc/ccdsClick.h @@ -1,27 +1,27 @@ /* ccdsClick - click handling for CCDS track and related functions */ /* Copyright (C) 2012 The Regents of the University of California * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #ifndef CCDSCLICK_H #define CCDSCLICK_H void printCcdsExtUrl(char *ccdsId); /* Print out URL to link to CCDS database at NCBI */ -void printCcdsForSrcDb(struct sqlConnection *conn, char *acc); +void printCcdsForSrcDb(struct sqlConnection *conn, struct trackDb *tdb, char *acc); /* Print out CCDS hc link for a refseq, ensembl, or vega gene, if it * exists. */ struct ccdsGeneMap *getCcdsGenesForMappedGene(struct sqlConnection *conn, char *acc, char *mapTable); /* get a list of ccds genes associated with a current and window from a * mapping table, or NULL */ void printCcdsUrl(struct sqlConnection *conn, char *ccdsId); /* Print out CCDS hgc URL for a gene */ void doCcdsGene(struct trackDb *tdb, char *ccdsId); /* Process click on a CCDS gene. */ #endif