a63ab731936f5d59015097ac4c46631b10839d26 jcasper Sun May 17 01:11:14 2026 -0700 Installing updated hg.conf files from UCSC servers diff --git confs/hgwdev.hg.conf confs/hgwdev.hg.conf index c5ef4f9785f..21ecc3451cd 100644 --- confs/hgwdev.hg.conf +++ confs/hgwdev.hg.conf @@ -353,30 +353,31 @@ # sessionDataDir setting for saved session files. # The databases must be named as this prefix followed by {01, 02, 03, ... 31}. # For example, if the value is "customData" then the databases are named # customData01, customData02, ... customData31. sessionDataDbPrefix=customData # Allow the URL: /cgi-bin/hubApi to produce a WEB page # otherwise, it redirects to the help page # hubApi.allowHtml=on # Setting speeds up the browser by caching large trackDb (such as big hubs) # This setting became default in v495 for better mirror performance #cacheTrackDbDir=../trash/trackDbCache #cacheTrackDbDir=/dev/shm/trackDbCache #cacheTrackDbDir= +cacheTrackDbDir=/data/trackDbCache # Recommended track sets refs #25601 browser.recTrackSets=on #browser.recTrackSetsDetectChange=on ### Testing mouse over display function 2020-10 - Hiram #mouseOverEnabled=on # Enable hgPhyloPlace: hgPhyloPlaceEnabled=on nextstrainHost=https://nextstrain.org microbeTraceHost=https://microbetrace.cdc.gov hgPhyloPlaceServerDir=/data/apache/userdata/hgPhyloPlace/genome-test # Enable svg based bar charts @@ -491,29 +492,31 @@ # very experimental, only on hgwdev: support for an embedded IGV track, see #36337 showIgv=on # Enables approved hgLogin redirect #login.approvedReturn=https://genome-preview.ucsc.edu/ # Enables single path loading for bigBed. Also, affects bigGenePred and bigPsl. #bigBedOnePath=on ######## enables liftRequest functions: # chainFileRequestEmail=hiram@soe.ucsc.edu,mhaeussl@ucsc.edu chainFileRequestEmail=chain-file-request-group@ucsc.edu apiFromEmail=genome-www@soe.ucsc.edu # table name in hgcentral to record requests for otto jobs ottoTable=ottoRequest +# set to 0 for unlimited per-day +liftDailyLimit=3 # calculate GC track on the fly gcOnTheFly=on # allow the track to appear even if gc5Base or gc5BaseBw are already there gcOnTheFlyCoExist=off # allow most tracks to have an override color that ignores trackDb and the item coloring showColorPicker=on # Show chromosome aliases on hgTracks showAliases=on # Enable/disable myVariants feature -doMyVariants=off +doMyVariants=on