459736686ba7726d2e9bfe63757183b4e8153e53
lrnassar
  Wed May 13 13:09:18 2026 -0700
varFreqs: set default visibility to hide on all 26 non-summary subtracks.

Leaves varFreqsAll on pack (the summary combined-track stays the default view)
and the supertrack on hide. Users opt into individual cohorts via the
combined-track filter; enabling the supertrack no longer tries to render 25+
vcfTabix tracks at once. Confirmed by Max. refs #36642

diff --git src/hg/makeDb/trackDb/human/varFreqs.ra src/hg/makeDb/trackDb/human/varFreqs.ra
index 7b805e500b9..c8c396e9d12 100644
--- src/hg/makeDb/trackDb/human/varFreqs.ra
+++ src/hg/makeDb/trackDb/human/varFreqs.ra
@@ -1,564 +1,564 @@
 track varFreqs
 shortLabel Variant Frequencies
 longLabel Variant Frequencies from various cohorts or national projects
 group varRep
 type bed 12
 visibility hide
 superTrack on
 
         track varFreqsAll
         shortLabel All Databases Combined
         longLabel Variant Frequencies: All Databases Combined with Consequence Annotations
         type bigBed 9 +
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/varFreqsAll.bb
         visibility pack
         itemRgb on
         maxWindowToDraw 5000000
         priority 0.1
         mouseOver <b>Var:</b> $name<br><b>AA change:</b> $aaChange<br><b>Var type:</b> $varType<br><b>Conseq:</b> $consequence<br><b>Max AF:</b> $maxAF<br><b>Total AC:</b> $totalAC<br><b>Sources:</b> $sources
         # Variant type and consequence filters
         filterValues.varType SNV|SNV,INS|Insertion,DEL|Deletion,MNV|MNV
         filterLabel.varType Variant Type
         filterValues.consequence missense|Missense,synonymous|Synonymous,stop_gained|Stop Gained,frameshift|Frameshift,splice_donor|Splice Donor,splice_acceptor|Splice Acceptor,intron|Intron,3_prime_utr|3' UTR,5_prime_utr|5' UTR,non_coding|Non-coding,.|Intergenic,others|Other
         filterType.consequence multipleListOr
         filterLabel.consequence Consequence
         # Source database filter
         filterValues.sources AllOfUs|AllOfUs,SPARK|SPARK WES,SFARI_WGS|SFARI WGS,GenomeAsia|GenomeAsia SNVs,GenomeAsiaIndel|GenomeAsia Indels,KOVA|KOVA Korea,ToMMo|ToMMo Japan,IndiGen|IndiGenomes India,FinnGen|FinnGen Finland,Saudi|Saudi,SweGen|SweGen Sweden,TOPMed|TOPMed,ABraOM|ABraOM Brazil,ALFA|ALFA,MGRB|MGRB Australia,HRC|HRC,MexBB|Mexico Biobank,SGDP|SGDP,HGDP1kG|gnomAD HGDP+1kG,GREGoR|GREGoR,SCHEMA|SCHEMA,GA4K|GA4K PacBio LR,CoLoRSdb|CoLoRSdb PacBio LR,SVatalog|SVatalog 101 10XG SR,Tishkoff180|Tishkoff 180 African WGS,NPM|NPM Singapore
         filterType.sources multipleListOr
         filterLabel.sources Source Database
         # Length filters
         filterByRange.refLen on
         filterLabel.refLen Reference Length
         filterByRange.altLen on
         filterLabel.altLen Alternate Length
         filterByRange.varLen on
         filterLabel.varLen Length Change
         # Max AF filter
         filterByRange.maxAF on
         filterLabel.maxAF Max Allele Frequency
         filterLimits.maxAF 0:1
         # Total AC filter
         filterByRange.totalAC on
         filterLabel.totalAC Total Allele Count (all databases)
         # Per-database AF filters
         filterByRange.AllOfUsAF on
         filterLabel.AllOfUsAF AllOfUs AF
         filterByRange.SPARKAF on
         filterLabel.SPARKAF SPARK WES AF
         filterByRange.SFARI_WGSAF on
         filterLabel.SFARI_WGSAF SFARI WGS AF
         filterByRange.GenomeAsiaAF on
         filterLabel.GenomeAsiaAF GenomeAsia SNVs AF
         filterByRange.GenomeAsiaIndelAF on
         filterLabel.GenomeAsiaIndelAF GenomeAsia Indels AF
         filterByRange.KOVAAF on
         filterLabel.KOVAAF KOVA Korea AF
         filterByRange.ToMMoAF on
         filterLabel.ToMMoAF ToMMo Japan AF
         filterByRange.IndiGenAF on
         filterLabel.IndiGenAF IndiGenomes India AF
         filterByRange.FinnGenAF on
         filterLabel.FinnGenAF FinnGen Finland AF
         filterByRange.SaudiAF on
         filterLabel.SaudiAF Saudi AF
         filterByRange.SweGenAF on
         filterLabel.SweGenAF SweGen Sweden AF
         filterByRange.TOPMedAF on
         filterLabel.TOPMedAF TOPMed AF
         filterByRange.ABraOMAF on
         filterLabel.ABraOMAF ABraOM Brazil AF
         filterByRange.ALFAAF on
         filterLabel.ALFAAF ALFA AF
         filterByRange.MGRBAF on
         filterLabel.MGRBAF MGRB Australia AF
         filterByRange.HRCAF on
         filterLabel.HRCAF HRC AF
         filterByRange.MexBBAF on
         filterLabel.MexBBAF Mexico Biobank AF
         filterByRange.SGDPAF on
         filterLabel.SGDPAF SGDP AF
         filterByRange.HGDP1kGAF on
         filterLabel.HGDP1kGAF gnomAD HGDP+1kG AF (4k cohort)
         filterByRange.GREGoRAF on
         filterLabel.GREGoRAF GREGoR AF
         filterByRange.SCHEMAAF on
         filterLabel.SCHEMAAF SCHEMA AF
         filterByRange.GA4KAF on
         filterLabel.GA4KAF GA4K PacBio LR AF
         filterByRange.CoLoRSdbAF on
         filterLabel.CoLoRSdbAF CoLoRSdb PacBio LR AF
         filterByRange.SVatalogAF on
         filterLabel.SVatalogAF SVatalog 101 10XG SR AF
         filterByRange.Tishkoff180AF on
         filterLabel.Tishkoff180AF Tishkoff 180 African WGS AF
         filterByRange.NPMAF on
         filterLabel.NPMAF NPM Singapore AF
         # Per-database AC filters
         filterByRange.AllOfUsAC on
         filterLabel.AllOfUsAC AllOfUs AC
         filterByRange.SPARKAC on
         filterLabel.SPARKAC SPARK WES AC
         filterByRange.SFARI_WGSAC on
         filterLabel.SFARI_WGSAC SFARI WGS AC
         filterByRange.GenomeAsiaAC on
         filterLabel.GenomeAsiaAC GenomeAsia SNVs AC
         filterByRange.GenomeAsiaIndelAC on
         filterLabel.GenomeAsiaIndelAC GenomeAsia Indels AC
         filterByRange.KOVAAC on
         filterLabel.KOVAAC KOVA Korea AC
         filterByRange.ToMMoAC on
         filterLabel.ToMMoAC ToMMo Japan AC
         filterByRange.IndiGenAC on
         filterLabel.IndiGenAC IndiGenomes India AC
         filterByRange.FinnGenAC on
         filterLabel.FinnGenAC FinnGen Finland AC
         filterByRange.SaudiAC on
         filterLabel.SaudiAC Saudi AC
         filterByRange.SweGenAC on
         filterLabel.SweGenAC SweGen Sweden AC
         filterByRange.TOPMedAC on
         filterLabel.TOPMedAC TOPMed AC
         filterByRange.ABraOMAC on
         filterLabel.ABraOMAC ABraOM Brazil AC
         filterByRange.ALFAAC on
         filterLabel.ALFAAC ALFA AC
         filterByRange.MGRBAC on
         filterLabel.MGRBAC MGRB Australia AC
         filterByRange.HRCAC on
         filterLabel.HRCAC HRC AC
         filterByRange.MexBBAC on
         filterLabel.MexBBAC Mexico Biobank AC
         filterByRange.SGDPAC on
         filterLabel.SGDPAC SGDP AC
         filterByRange.HGDP1kGAC on
         filterLabel.HGDP1kGAC gnomAD HGDP+1kG AC (4k cohort)
         filterByRange.GREGoRAC on
         filterLabel.GREGoRAC GREGoR AC
         filterByRange.SCHEMAAC on
         filterLabel.SCHEMAAC SCHEMA AC
         filterByRange.GA4KAC on
         filterLabel.GA4KAC GA4K PacBio LR AC
         filterByRange.CoLoRSdbAC on
         filterLabel.CoLoRSdbAC CoLoRSdb PacBio LR AC
         filterByRange.SVatalogAC on
         filterLabel.SVatalogAC SVatalog 101 10XG SR AC
         filterByRange.Tishkoff180AC on
         filterLabel.Tishkoff180AC Tishkoff 180 African WGS AC
         filterByRange.NPMAC on
         filterLabel.NPMAC NPM Singapore AC
         # Population-specific AF filters
         # AllOfUs local-ancestry populations
         # NB: these are local-ancestry-stratified frequencies (per-position, per-haplotype-class),
         # NOT the AllOfUs paper's global Rye ancestry categories. See varFreqs.html for details.
         filterByRange.AllOfUsAF_AFR on
         filterLabel.AllOfUsAF_AFR AllOfUs African AF (local ancestry)
         filterByRange.AllOfUsAF_AMR on
         filterLabel.AllOfUsAF_AMR AllOfUs Indigenous American AF (local ancestry)
         filterByRange.AllOfUsAF_EAS on
         filterLabel.AllOfUsAF_EAS AllOfUs East Asian AF (local ancestry)
         filterByRange.AllOfUsAF_EUR on
         filterLabel.AllOfUsAF_EUR AllOfUs European AF (local ancestry)
         filterByRange.AllOfUsAF_OCE on
         filterLabel.AllOfUsAF_OCE AllOfUs Oceanian AF (local ancestry)
         filterByRange.AllOfUsAF_SAS on
         filterLabel.AllOfUsAF_SAS AllOfUs South Asian AF (local ancestry)
         filterByRange.AllOfUsAC_AFR on
         filterLabel.AllOfUsAC_AFR AllOfUs African AC (local ancestry)
         filterByRange.AllOfUsAC_AMR on
         filterLabel.AllOfUsAC_AMR AllOfUs Indigenous American AC (local ancestry)
         filterByRange.AllOfUsAC_EAS on
         filterLabel.AllOfUsAC_EAS AllOfUs East Asian AC (local ancestry)
         filterByRange.AllOfUsAC_EUR on
         filterLabel.AllOfUsAC_EUR AllOfUs European AC (local ancestry)
         filterByRange.AllOfUsAC_OCE on
         filterLabel.AllOfUsAC_OCE AllOfUs Oceanian AC (local ancestry)
         filterByRange.AllOfUsAC_SAS on
         filterLabel.AllOfUsAC_SAS AllOfUs South Asian AC (local ancestry)
         # GenomeAsia SNVs populations (7 groups in source VCF)
         filterByRange.GenomeAsiaAF_NEA on
         filterLabel.GenomeAsiaAF_NEA GenomeAsia SNVs Northeast Asian AF
         filterByRange.GenomeAsiaAF_SEA on
         filterLabel.GenomeAsiaAF_SEA GenomeAsia SNVs Southeast Asian AF
         filterByRange.GenomeAsiaAF_SAS on
         filterLabel.GenomeAsiaAF_SAS GenomeAsia SNVs South Asian AF
         filterByRange.GenomeAsiaAF_OCE on
         filterLabel.GenomeAsiaAF_OCE GenomeAsia SNVs Oceanian AF
         filterByRange.GenomeAsiaAF_AMR on
         filterLabel.GenomeAsiaAF_AMR GenomeAsia SNVs American AF
         filterByRange.GenomeAsiaAF_AFR on
         filterLabel.GenomeAsiaAF_AFR GenomeAsia SNVs African AF
         filterByRange.GenomeAsiaAF_WER on
         filterLabel.GenomeAsiaAF_WER GenomeAsia SNVs Western European Ref AF
         filterByRange.GenomeAsiaAC_NEA on
         filterLabel.GenomeAsiaAC_NEA GenomeAsia SNVs Northeast Asian AC
         filterByRange.GenomeAsiaAC_SEA on
         filterLabel.GenomeAsiaAC_SEA GenomeAsia SNVs Southeast Asian AC
         filterByRange.GenomeAsiaAC_SAS on
         filterLabel.GenomeAsiaAC_SAS GenomeAsia SNVs South Asian AC
         filterByRange.GenomeAsiaAC_OCE on
         filterLabel.GenomeAsiaAC_OCE GenomeAsia SNVs Oceanian AC
         filterByRange.GenomeAsiaAC_AMR on
         filterLabel.GenomeAsiaAC_AMR GenomeAsia SNVs American AC
         filterByRange.GenomeAsiaAC_AFR on
         filterLabel.GenomeAsiaAC_AFR GenomeAsia SNVs African AC
         filterByRange.GenomeAsiaAC_WER on
         filterLabel.GenomeAsiaAC_WER GenomeAsia SNVs Western European Ref AC
         # gnomAD HGDP+1kG: per-population AF/AC values are from the FULL gnomAD v3.1.2
         # release (~76k genomes), not the 4,094-genome HGDP+1kG cohort. Only the
         # cohort-level HGDP1kGAF / HGDP1kGAC fields above reflect the 4k-cohort.
         filterByRange.HGDP1kGAF_afr on
         filterLabel.HGDP1kGAF_afr gnomAD v3.1.2 African AF (full release)
         filterByRange.HGDP1kGAF_ami on
         filterLabel.HGDP1kGAF_ami gnomAD v3.1.2 Amish AF (full release)
         filterByRange.HGDP1kGAF_amr on
         filterLabel.HGDP1kGAF_amr gnomAD v3.1.2 Latino AF (full release)
         filterByRange.HGDP1kGAF_asj on
         filterLabel.HGDP1kGAF_asj gnomAD v3.1.2 Ashkenazi Jewish AF (full release)
         filterByRange.HGDP1kGAF_eas on
         filterLabel.HGDP1kGAF_eas gnomAD v3.1.2 East Asian AF (full release)
         filterByRange.HGDP1kGAF_fin on
         filterLabel.HGDP1kGAF_fin gnomAD v3.1.2 Finnish AF (full release)
         filterByRange.HGDP1kGAF_mid on
         filterLabel.HGDP1kGAF_mid gnomAD v3.1.2 Middle Eastern AF (full release)
         filterByRange.HGDP1kGAF_nfe on
         filterLabel.HGDP1kGAF_nfe gnomAD v3.1.2 Non-Finnish European AF (full release)
         filterByRange.HGDP1kGAF_oth on
         filterLabel.HGDP1kGAF_oth gnomAD v3.1.2 Other AF (full release)
         filterByRange.HGDP1kGAF_sas on
         filterLabel.HGDP1kGAF_sas gnomAD v3.1.2 South Asian AF (full release)
         filterByRange.HGDP1kGAC_afr on
         filterLabel.HGDP1kGAC_afr gnomAD v3.1.2 African AC (full release)
         filterByRange.HGDP1kGAC_ami on
         filterLabel.HGDP1kGAC_ami gnomAD v3.1.2 Amish AC (full release)
         filterByRange.HGDP1kGAC_amr on
         filterLabel.HGDP1kGAC_amr gnomAD v3.1.2 Latino AC (full release)
         filterByRange.HGDP1kGAC_asj on
         filterLabel.HGDP1kGAC_asj gnomAD v3.1.2 Ashkenazi Jewish AC (full release)
         filterByRange.HGDP1kGAC_eas on
         filterLabel.HGDP1kGAC_eas gnomAD v3.1.2 East Asian AC (full release)
         filterByRange.HGDP1kGAC_fin on
         filterLabel.HGDP1kGAC_fin gnomAD v3.1.2 Finnish AC (full release)
         filterByRange.HGDP1kGAC_mid on
         filterLabel.HGDP1kGAC_mid gnomAD v3.1.2 Middle Eastern AC (full release)
         filterByRange.HGDP1kGAC_nfe on
         filterLabel.HGDP1kGAC_nfe gnomAD v3.1.2 Non-Finnish European AC (full release)
         filterByRange.HGDP1kGAC_oth on
         filterLabel.HGDP1kGAC_oth gnomAD v3.1.2 Other AC (full release)
         filterByRange.HGDP1kGAC_sas on
         filterLabel.HGDP1kGAC_sas gnomAD v3.1.2 South Asian AC (full release)
         # GREGoR populations
         filterByRange.GREGoRAF_AFF on
         filterLabel.GREGoRAF_AFF GREGoR Affected AF
         filterByRange.GREGoRAF_UNA on
         filterLabel.GREGoRAF_UNA GREGoR Unaffected AF
         filterByRange.GREGoRAF_UNK on
         filterLabel.GREGoRAF_UNK GREGoR Unknown AF
         filterByRange.GREGoRAC_AFF on
         filterLabel.GREGoRAC_AFF GREGoR Affected AC
         filterByRange.GREGoRAC_UNA on
         filterLabel.GREGoRAC_UNA GREGoR Unaffected AC
         filterByRange.GREGoRAC_UNK on
         filterLabel.GREGoRAC_UNK GREGoR Unknown AC
         # NPM Singapore ancestry groups
         filterByRange.NPMAF_Chinese on
         filterLabel.NPMAF_Chinese NPM Singapore Chinese AF
         filterByRange.NPMAF_Malay on
         filterLabel.NPMAF_Malay NPM Singapore Malay AF
         filterByRange.NPMAF_Indian on
         filterLabel.NPMAF_Indian NPM Singapore Indian AF
         filterByRange.NPMAC_Chinese on
         filterLabel.NPMAC_Chinese NPM Singapore Chinese AC
         filterByRange.NPMAC_Malay on
         filterLabel.NPMAC_Malay NPM Singapore Malay AC
         filterByRange.NPMAC_Indian on
         filterLabel.NPMAC_Indian NPM Singapore Indian AC
         skipEmptyFields on
        
         track allofus
         shortLabel AllOfUs v7 245k WGS
         longLabel Variant Frequencies: AllOfUs v7 - 245k WGS, local-ancestry-stratified, AC>=20
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/allofus/allOfUs.locAncFreq.vcf.gz
         dataVersion V7
-        visibility dense
+        visibility hide
         priority 0.5
 
         #track me
         #shortLabel Regeneron Million Exomes 983k WES
         #longLabel Variant Frequencies: Regeneron One Million Exomes (ME) Project - 983k WGS
         #parent varFreqs on
         #bigDataUrl /gbdb/$D/varFreqs/me/me.freq.vcf.gz
         #visibility pack
         #type vcfTabix
         #hapClusterEnabled true
         #dataVersion 10/04/2023, v1.1.3
         #tableBrowser off
         #priority 1
 
         track topmed
         shortLabel NHLBI TOPMed 10 151k WGS
         longLabel Variant Frequencies: NHLBI TOPMed - 151k WGS
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/topmed/topmed10.vcf.gz
         dataVersion Freeze 10
-        visibility dense
+        visibility hide
         priority 2
 
         track sfariSparkExomes
         shortLabel SFARI SPARK 140k WES
         longLabel Variant Frequencies: SFARI SPARK - 140k WES
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/sfari/SPARK.iWES_v3.2024_08.deepvariant.norm.vcf.gz
         dataVersion iWES v3 2024_08
-        visibility dense
+        visibility hide
         priority 2.5
 
         track sfariSparkWgs
         shortLabel SFARI SPARK 12k WGS
         longLabel Variant Frequencies: SFARI SPARK - 12,519 WGS
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/sfari/wgs_12519_genome.deepvariant.norm.vcf.gz
         dataVersion iWGS v1.1
-        visibility dense
+        visibility hide
         priority 2.5
         html sfariSparkExomes
 
         #track mcps
         #shortLabel Mexico City Prospective Study 10k WGS+141k WES
         #longLabel Variant Frequencies: Mexico City Prospective Study (MCPS)
         #tableBrowser off
         #parent varFreqs on
         #bigDataUrl /gbdb/$D/varFreqs/mcps/mcps.freq.vcf.gz
         #visibility pack
         #type vcfTabix
         #dataVersion May 2023 (v1.2.0)
         #priority 3
 
         track tommo60kjpn
         shortLabel Japan ToMMo 61k WGS
         longLabel Variant Frequencies: Japan 61k - ToMMo SNV+Indels
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/tommo61kjpn/tommo-61kjpn-20250616-GRCh38-snvindel-af-autosome.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion 2025-06-16
         priority 5
 
         track alfaVcf
         shortLabel NCBI ALFA 408k mixed
         longLabel Variant Frequencies: NCBI ALFA (dbGaP data) - 408k mixed WGS/WES/array, 163M variants
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/alfa/ALFA.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion R4
         priority 4.1
         url https://www.ncbi.nlm.nih.gov/snp/$$#frequency_tab
         urlLabel NCBI Variation Page
 
         track finngen
         parent varFreqs on
-        visibility dense
+        visibility hide
         type vcfTabix
         shortLabel FinnGen R12 500k imputed
         longLabel Variant Frequencies: Finland FinnGen - 500k samples, arrays, imputation used 8.5k WGS
         priority 4.5
         bigDataUrl /gbdb/$D/varFreqs/finngen/finnge_R12_annotated_variants_v1.vcf.gz
         dataVersion R12
         tableBrowser off
 
         track swefreq
         parent varFreqs on
-        visibility dense
+        visibility hide
         type vcfTabix
         shortLabel Sweden SweGen 1k WGS
         longLabel Variant Frequencies: Sweden SweGen - 1k WGS
         priority 4.7
         bigDataUrl /gbdb/$D/varFreqs/swefreq/swegen_frequencies_fixploidy_GRCh38_20190204.vcf.gz
         dataVersion 20251201
         tableBrowser off
 
         track mgrb
         shortLabel Australia MGRB 4k WGS
         longLabel Variant Frequencies: Australia Medical Genome Reference Bank - 4,011 WGS
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/mgrb/MGRB.phase3.GRCh38.norm.vcf.gz
         dataVersion Phase 3
-        visibility dense
+        visibility hide
         # no downloads as per Matt Hobbs email Jan 28 2026
         tableBrowser off
 
         track gasp
         shortLabel GenomeAsia 1.7k SNVs
         longLabel Variant Frequencies: GenomeAsia Pilot - Substitutions
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/ga100k/ga100k.subst.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion Pilot 2019 (lifted to hg38, May 2026)
 
         track gaspIndel
         shortLabel GenomeAsia 1.7k Indels
         longLabel Variant Frequencies: GenomeAsia Pilot - Indels
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/ga100k/ga100k.indels.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion Pilot 2019 (lifted to hg38, May 2026)
         html gasp
 
         track abraom
         shortLabel Brazil ABraOM 1k WGS
         longLabel Variant Frequencies: ABraOM Brazil - 1,171 unrelated individuals
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/abraom/abraom.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion SABE-WGS-1171 Sep 2020
 
         track indigenomes
         shortLabel India IndiGenomes 1k WGS
         longLabel Variant Frequencies: IndiGenomes India - 1,029 samples
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/indigenomes/IndiGenomes_Variants.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion IndiGen pilot (Jain 2021)
 
         track kova
         shortLabel Korea KOVA 5.3k mixed
         longLabel Variant Frequencies: KOVA Korea - 5305 samples, 1.9k WGS+3.4k WES
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/kova/kova.v7.vcf.gz
-        visibility dense
+        visibility hide
         tableBrowser off
         dataVersion V7
 
         track npm
         shortLabel Singapore NPM 9.7k WGS
         longLabel Variant Frequencies: NPM Singapore - 9,770 WGS samples
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/npm/SG10K_Health_r5.3.2.sites.vcf.bgz
-        visibility dense
+        visibility hide
         tableBrowser off
         dataVersion r5.3.2
 
         track hrc
         shortLabel HRC 30k WGS
         longLabel Variant Frequencies: Haplotype Reference Consortium - 30k WGS (excl. 1000 Genomes)
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/hrc/hrc.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion r1.1
 
         track saudi
         shortLabel Saudi Genome 302 WGS
         longLabel Variant Frequencies: Saudi Genome Project - 302 WGS samples
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/saudi/saudi.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion SHGP (figshare 51297884, 2025)
 
         track schema
         shortLabel SCHEMA 121k WES Sz
         longLabel Variant Frequencies: SCHEMA Schizophrenia Exome Meta-Analysis - WES 24k cases, 97k controls
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/schema/SCHEMA_variant_results_withAF.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion 2022
         priority 4.9
         url https://schema.broadinstitute.org/
         urlLabel SCHEMA Browser
 
         track mxbFreq
         shortLabel Mexico Biobank 6k Array
         longLabel Variant Frequencies: Mexico Biobank - 6,011 individuals, genotyping array
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/mxb/mxb.freq.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion Nov 2025 (hg38 lift)
         priority 6
 
         track sgdpFreq
         shortLabel SGDP 279 WGS
         longLabel Variant Frequencies: Simons Genome Diversity Project - 279 WGS, 142 populations
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/sgdpFreq/sgdp.freq.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion 2016-12-07 (hg38 lift)
         priority 7
 
         track gregor
         shortLabel GREGoR R4 3.6k WGS
         longLabel Variant Frequencies: GREGoR Consortium - Release 4, 3,624 WGS samples, rare disease families
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/gregor/gregor.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion R04 (Oct 2025)
         priority 8
 
         track hgdp1kFreq
         shortLabel gnomAD HGDP+1kG 4k WGS
         longLabel Variant Frequencies: gnomAD HGDP + 1000 Genomes - 4,094 WGS, 80 populations
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/hgdp1kFreq/hgdp1k.freq.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion v3.1.2
         priority 8
 
         track ga4kSnv
         shortLabel GA4K 552 PacBio LR
         longLabel Variant Frequencies: GA4K Children's Mercy - 552 PacBio HiFi WGS, pediatric RD
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/ga4k/ga4kSnv.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion Cohen 2022 release
         priority 9
 
         track colorsDbSnv
         shortLabel CoLoRSdb 1k LR SNV/Ind
         longLabel Variant Frequencies: CoLoRSdb v1.2.0 - 1,027 PacBio HiFi WGS, SNV/indel callset
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/colorsDb/colorsDbSnv.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion v1.2.0
         priority 9.5
 
         track svatalogSnv
         shortLabel SVatalog 101 WGS
         longLabel Variant Frequencies: GWAS SVatalog - 101 samples, 10X Genomics linked-read SNPs
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/svatalog/svatalog.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion Chirmade 2025 release
         priority 10
 
         track tishkoff180
         shortLabel 12 Afr Pops 180 WGS
         longLabel Variant Frequencies: 180 WGS from 12 Indigenous African Populations (Fan 2023)
         type vcfTabix
         parent varFreqs on
         bigDataUrl /gbdb/$D/varFreqs/tishkoff/tishkoff180.vcf.gz
-        visibility dense
+        visibility hide
         dataVersion Cell 2023 (hg19 lift)
         tableBrowser off
         priority 7.5