7df6e18265341f87a69fba808aa1f92f8ebca841
markd
  Wed Apr 15 13:39:42 2026 -0700
move copy of htslib

diff --git src/htslib/cram/zfio.h src/htslib/cram/zfio.h
deleted file mode 100644
index ab9c9c97cb1..00000000000
--- src/htslib/cram/zfio.h
+++ /dev/null
@@ -1,62 +0,0 @@
-/*
-Copyright (c) 2009-2013 Genome Research Ltd.
-Author: James Bonfield <jkb@sanger.ac.uk>
-
-Redistribution and use in source and binary forms, with or without 
-modification, are permitted provided that the following conditions are met:
-
-   1. Redistributions of source code must retain the above copyright notice, 
-this list of conditions and the following disclaimer.
-
-   2. Redistributions in binary form must reproduce the above copyright notice, 
-this list of conditions and the following disclaimer in the documentation 
-and/or other materials provided with the distribution.
-
-   3. Neither the names Genome Research Ltd and Wellcome Trust Sanger
-Institute nor the names of its contributors may be used to endorse or promote
-products derived from this software without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY GENOME RESEARCH LTD AND CONTRIBUTORS "AS IS" AND 
-ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED 
-WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE 
-DISCLAIMED. IN NO EVENT SHALL GENOME RESEARCH LTD OR CONTRIBUTORS BE LIABLE
-FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
-DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
-SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
-CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
-OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
-OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-*/
-
-#ifndef _ZFIO_H_
-#define _ZFIO_H_
-
-#include <stdio.h>
-#include <zlib.h>
-
-#ifdef __cplusplus
-extern "C" {
-#endif
-
-/*
- * Either a gzFile or a FILE.
- */
-typedef struct {
-    FILE   *fp;
-    gzFile  gz;
-} zfp;
-
-off_t zftello(zfp *zf);
-int zfseeko(zfp *zf, off_t offset, int whence);
-char *zfgets(char *line, int size, zfp *zf);
-int zfputs(char *line, zfp *zf);
-zfp *zfopen(const char *path, const char *mode);
-int zfclose(zfp *zf);
-int zfpeek(zfp *zf);
-int zfeof(zfp *zf);
-
-#ifdef __cplusplus
-}
-#endif
-
-#endif /* _ZFIO_H_ */